Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00248 ATGCGACAAGAGAACACAGTCACCGTGGATTCAAACCCCACAGAGCAAAATACTCAATCTTTGGATTTTGATGCTGAGTGTGAGGCCGATGAGACCAAAGCAATCGACTTCGCTGGAAAAGATGATGATGGGGCAGGAGGGTATTCTTCTGTTGCAGAAGGTGTGAAAAGGAAGCGTGACAGAAAGAGTGAAGAGGAGGAGGGTATGGGAACGATGTTAGAGGGCCATTTGTTGGAGGAGAACAATGGTCAAGACGGAAACCATGGTGAAAATGGTGGGGTTGGAGTTTCTTCTTCTGTTCAAGGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAAAAAGAGAAGGAAGAGATGGAAATGAAGTTGTCAGGGGGCAATTTGTTGGAGAAGAATGGTGTTGAATACGTTAGCCATGGTGAAAATGGTGGGGTAGGAGATTCTTCTGTTCCACGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAGAAAGAGAAGGAAGACATGGAATTGAAGATGTCAGGGGGCAATTTGTTGGAGAAGAAGGGTGGTTCTTCTTCTGTTCAAGAAGGTGTGAGAGAGAAGCCTGGGAGTAATGGCGGGGTTGCTTATAAGAGACGTGGGAGAAAAAGAAAGGTTGTTAAGGAAGGTGACGACGAGTTTGAAACGCCTGCGTTTTTTTCAGGAAGTGGCAGTCAGAAACAATATAGTCTTAGAAGCCCTAAAGTCAAAATAGAAGTGGTAATGCCAAAAATCAACAAGAAGGATAGTAAGTTGACTGAAGAACAGTCCTCAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCACAAAGTGTAATAGGAAAAGATTTTGCGTACCCTGTATACTAAATTGGTATCCTCATTTGGAAGAGGATTACATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCTGATGTACTGATTAAAGAAATGAAGAAAAAAACAAAAACCAATAAAGATGAGAAGGTTGAACTGTCTACGTATTTGCTGCAAGTACTTCTTCCGTATTTAAGATTGTTGGATGAAGAACAAATGGCTGAGAAAGAGACAGAAGCTAAGATACAGGGGATCTCAATCTCAGAGATAAATGTAGTACATGCAGATTACTCTATTAAGGAGCGTGTATATTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGTTCTTTTGATCTTTGTCTCATCTGTTGCCGCGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTATGTTGGAGTTTTCCTGGCAAGGTCGTGGTTACTTGCATGGTGAAAAAGTAAATAAAAGGGTAAACCAAACTGAATCAAATGATGTTGCTAAGCCTGTAGTTCGTGAATGGTCAAGATCTGGATGGCATGCAGAAAGTAATGGTGGCATTCCTTGTCCAAAAGTCAGTGATGAATGTAATCATGGTTTTCTTGAACTGAGAAGTGTATTAGGTCAAAATTTTATTAGTGATTTGTTGTGTAAAGCAAATGAACTAGCACAAACATACGAGCTTGGGACCCCTGACAACTTCTGTTTGTGTTCAAGGCTTGATAGAAACACAGATGTTAGATATAATGGTATGAGGAAGGCTGCTTCCCGTGCAGATTCCAGTGACAACTATTTGTACTGTCCTAGGGCTGTACAACTACAAGAAGAGGATTTAGGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTTAGCCATGTGATTGATTCTATGTCTGGCTTAAGCTGGGAACCCCTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACACCATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGTGAAATTAATATTCACCAATTCTTTACTGGGTATACAAAAGCTCGTGAAGATTGGCTTAATTGGCCTCAGATATTGAAATTAAAAGACTGGCCACCTTCTAATTTATTTGAGGAACGCCTGCCTCGACATTGTGCTGAGTTCATATCTTCCTTGCCATTCAAGGAATATACTGATCCTCTTGGTGGTTTTCTTAACCTAGCTGTGAAATTGCCTGGAGAGTGTATAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGACTCGGTGACTAAGCTCCACTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTTAAATTGGAACCAAAGCATCTTACTGCCATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAAAGGGAGCTACTTAGTGATGATCAGGATGGAGAAACTAATGTTGACATGCATGATAATATATCTTCTGCCATAAATTCCTTGCAGAAGCAAAATAGTATCCAAGTTTTGGAAAGCAAAAGTGGATGTTGTGATGAGAAAGAAGATCAGTTTCATCAACCCTCTGTTGGTAGTGAGGTTGCCATTGCTAGTGAGGATGGTCTTTCATGCGGATCTGAGCTCAAAGAGGTTAACAAAATAAATATGAAGCAAGAAAGTGATATGTCGTTTGCAGGGGATGGTTCAGAAGGTGCTCTGTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAGTATATGAGGAAGCATTTCAGAGAGTTTAGGCATATCCACTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATTTGACCGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTTCGGAATTGAGCCCTGGACATTCATTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAGGTCAGAAATCTGAAGATGAGGGAAACTTGA 2907 0.4197 MRQENTVTVDSNPTEQNTQSLDFDAECEADETKAIDFAGKDDDGAGGYSSVAEGVKRKRDRKSEEEEGMGTMLEGHLLEENNGQDGNHGENGGVGVSSSVQGVKKKRGRKSKKEKEEMEMKLSGGNLLEKNGVEYVSHGENGGVGDSSVPRVKKKRGRKSKKEKEDMELKMSGGNLLEKKGGSSSVQEGVREKPGSNGGVAYKRRGRKRKVVKEGDDEFETPAFFSGSGSQKQYSLRSPKVKIEVVMPKINKKDSKLTEEQSSMCHQCQRNDKGRVVRCTKCNRKRFCVPCILNWYPHLEEDYIAEACPVCRGNCNCKACLRSDVLIKEMKKKTKTNKDEKVELSTYLLQVLLPYLRLLDEEQMAEKETEAKIQGISISEINVVHADYSIKERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIMLEFSWQGRGYLHGEKVNKRVNQTESNDVAKPVVREWSRSGWHAESNGGIPCPKVSDECNHGFLELRSVLGQNFISDLLCKANELAQTYELGTPDNFCLCSRLDRNTDVRYNGMRKAASRADSSDNYLYCPRAVQLQEEDLGHFQWHWEKGEPVIVSHVIDSMSGLSWEPLVMWRAFRQMTKTKHEHHLDVKAIDCLDWCEGEINIHQFFTGYTKAREDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLGGFLNLAVKLPGECIKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLEPKHLTAIEKLKQKHFEQDKRELLSDDQDGETNVDMHDNISSAINSLQKQNSIQVLESKSGCCDEKEDQFHQPSVGSEVAIASEDGLSCGSELKEVNKINMKQESDMSFAGDGSEGALWDIFRRQDVPKLQEYMRKHFREFRHIHCSPLKQVIHPIHDQTFYLTVEHKRKLKEEFGIEPWTFIQKLGDAVFIPAGCPHQVRNLKMRET* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00248 968 Pfam JmjC domain, hydroxylase 877 964 IPR003347 -
Phac7g00248 968 MobiDBLite consensus disorder prediction 37 213 - -
Phac7g00248 968 MobiDBLite consensus disorder prediction 1 22 - -
Phac7g00248 968 MobiDBLite consensus disorder prediction 53 73 - -
Phac7g00248 968 SUPERFAMILY Clavaminate synthase-like 580 963 - -
Phac7g00248 968 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 69 964 IPR045109 GO:0032454|GO:0033169
Phac7g00248 968 ProSiteProfiles JmjC domain profile. 698 968 IPR003347 -
Phac7g00248 968 SMART cupin_9 679 967 IPR003347 -
Phac7g00248 968 Gene3D Cupin 564 966 - -
Phac7g00248 968 ProSiteProfiles Zinc finger RING-type profile. 265 312 IPR001841 -
Phac7g00248 968 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 260 325 IPR018866 -
Phac7g00248 968 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00248 Phac-Chr7 1177724 1189244 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac7g00248 JmjC 3.7e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00248 K15601 - gmx:112997634 1345.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00248 7 1177724 1189244 Phac7g00248 7 1177724 1189244 ECH