Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00247 ATGCGACAAGAGAACACAGTCACCGTGGATTCAAACCCCACAGAGCAAAATACTCAATCTTTGGATTTTGATGCTGAGTGTGAGGCCGATGAGACCAAAGCAATCGACTTCGCTGGAAAAGATGATGATGGGGCAGGAGGGTATTCTTCTGTTGCAGAAGGTGTGAAAAGGAAGCGTGACAGAAAGAGTGAAGAGGAGGAGGGTATGGGAACGATGTTAGAGGGCCATTTGTTGGAGGAGAACAATGGTCAAGACGGAAACCATGGTGAAAATGGTGGGGTTGGAGTTTCTTCTTCTGTTCAAGGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAAAAAGAGAAGGAAGAGATGGAAATGAAGTTGTCAGGGGGCAATTTGTTGGAGAAGAATGGTGTTGAATACGTTAGCCATGGTGAAAATGGTGGGGTAGGAGATTCTTCTGTTCCACGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAGAAAGAGAAGGAAGACATGGAATTGAAGATGTCAGGGGGCAATTTGTTGGAGAAGAAGGGTGGTTCTTCTTCTGTTCAAGAAGGTGTGAGAGAGAAGCCTGGGAGTAATGGCGGGGTTGCTTATAAGAGACGTGGGAGAAAAAGAAAGGTTGTTAAGGAAGGTGACGACGAGTTTGAAACGCCTGCGTTTTTTTCAGGAAGTGGCAGTCAGAAACAATATAGTCTTAGAAGCCCTAAAGTCAAAATAGAAGTGGTAATGCCAAAAATCAACAAGAAGGATAGTAAGCGACAGTTGACTGAAGAACAGTCCTCAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCACAAAGTGTAATAGGAAAAGATTTTGCGTACCCTGTATACTAAATTGGTATCCTCATTTGGAAGAGGATTACATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCTGATGTACTGATTAAAGAAATGAAGAAAAAAACAAAAACCAATAAAGATGAGAAGGTTGAACTGTCTACGTATTTGCTGCAAGTACTTCTTCCGTATTTAAGATTGTTGGATGAAGAACAAATGGCTGAGAAAGAGACAGAAGCTAAGATACAGGGGATCTCAATCTCAGAGATAAATGTAGTACATGCAGATTACTCTATTAAGGAGCGTGTATATTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGTTCTTTTGATCTTTGTCTCATCTGTTGCCGCGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTATGTTGGAGTTTTCCTGGCAAGGTCGTGGTTACTTGCATGGTGAAAAAGTAAATAAAAGGGTAAACCAAACTGAATCAAATGATGTTGCTAAGCCTGTAGTTCGTGAATGGTCAAGATCTGGATGGCATGCAGAAAGTAATGGTGGCATTCCTTGTCCAAAAGTCAGTGATGAATGTAATCATGGTTTTCTTGAACTGAGAAGTGTATTAGGTCAAAATTTTATTAGTGATTTGTTGTGTAAAGCAAATGAACTAGCACAAACATACGAGCTTGGGACCCCTGACAACTTCTGTTTGTGTTCAAGGCTTGATAGAAACACAGATGTTAGATATAATGGTATGAGGAAGGCTGCTTCCCGTGCAGATTCCAGTGACAACTATTTGTACTGTCCTAGGGCTGTACAACTACAAGAAGAGGATTTAGGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTTAGCCATGTGATTGATTCTATGTCTGGCTTAAGCTGGGAACCCCTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACACCATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGTGAAATTAATATTCACCAATTCTTTACTGGGTATACAAAAGCTCGTGAAGATTGGCTTAATTGGCCTCAGATATTGAAATTAAAAGACTGGCCACCTTCTAATTTATTTGAGGAACGCCTGCCTCGACATTGTGCTGAGTTCATATCTTCCTTGCCATTCAAGGAATATACTGATCCTCTTGGTGGTTTTCTTAACCTAGCTGTGAAATTGCCTGGAGAGTGTATAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGACTCGGTGACTAAGCTCCACTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTTAAATTGGAACCAAAGCATCTTACTGCCATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAAAGGGAGCTACTTAGTGATGATCAGGATGGAGAAACTAATGTTGACATGCATGATAATATATCTTCTGCCATAAATTCCTTGCAGAAGCAAAATAGTATCCAAGTTTTGGAAAGCAAAAGTGGATGTTGTGATGAGAAAGAAGATCAGTTTCATCAACCCTCTGTTGGTAGTGAGGTTGCCATTGCTAGTGAGGATGGTCTTTCATGCGGATCTGAGCTCAAAGAGGTTAACAAAATAAATATGAAGCAAGAAAGTGATATGTCGTTTGCAGGGGATGGTTCAGAAGGTGCTCTGTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAGTATATGAGGAAGCATTTCAGAGAGTTTAGGCATATCCACTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATTTGACCGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTTCGGAATTGAGCCCTGGACATTCATTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAGGTCAGAAATCTGAAGTCATGTATTAAGGTGGCATTGGATTTTGTTTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGTACACTTCCTATAAACCATGGGTCTGCTGAGGACAAATTGGAGGTGAAAAAGATGACAATATATGCTATGCAAGATGTGATAACAAAATTGGAGAATGCAAGGTCTGAAGTAAATATACCTGTAACAGACAAAGGGGAGGTGAAAGTGTGA 3126 0.4181 MRQENTVTVDSNPTEQNTQSLDFDAECEADETKAIDFAGKDDDGAGGYSSVAEGVKRKRDRKSEEEEGMGTMLEGHLLEENNGQDGNHGENGGVGVSSSVQGVKKKRGRKSKKEKEEMEMKLSGGNLLEKNGVEYVSHGENGGVGDSSVPRVKKKRGRKSKKEKEDMELKMSGGNLLEKKGGSSSVQEGVREKPGSNGGVAYKRRGRKRKVVKEGDDEFETPAFFSGSGSQKQYSLRSPKVKIEVVMPKINKKDSKRQLTEEQSSMCHQCQRNDKGRVVRCTKCNRKRFCVPCILNWYPHLEEDYIAEACPVCRGNCNCKACLRSDVLIKEMKKKTKTNKDEKVELSTYLLQVLLPYLRLLDEEQMAEKETEAKIQGISISEINVVHADYSIKERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIMLEFSWQGRGYLHGEKVNKRVNQTESNDVAKPVVREWSRSGWHAESNGGIPCPKVSDECNHGFLELRSVLGQNFISDLLCKANELAQTYELGTPDNFCLCSRLDRNTDVRYNGMRKAASRADSSDNYLYCPRAVQLQEEDLGHFQWHWEKGEPVIVSHVIDSMSGLSWEPLVMWRAFRQMTKTKHEHHLDVKAIDCLDWCEGEINIHQFFTGYTKAREDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLGGFLNLAVKLPGECIKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLEPKHLTAIEKLKQKHFEQDKRELLSDDQDGETNVDMHDNISSAINSLQKQNSIQVLESKSGCCDEKEDQFHQPSVGSEVAIASEDGLSCGSELKEVNKINMKQESDMSFAGDGSEGALWDIFRRQDVPKLQEYMRKHFREFRHIHCSPLKQVIHPIHDQTFYLTVEHKRKLKEEFGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHGSAEDKLEVKKMTIYAMQDVITKLENARSEVNIPVTDKGEVKV* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00247 1041 Pfam JmjC domain, hydroxylase 879 975 IPR003347 -
Phac7g00247 1041 ProSiteProfiles JmjC domain profile. 700 992 IPR003347 -
Phac7g00247 1041 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 72 1027 IPR045109 GO:0032454|GO:0033169
Phac7g00247 1041 MobiDBLite consensus disorder prediction 37 213 - -
Phac7g00247 1041 Gene3D Cupin 566 1000 - -
Phac7g00247 1041 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 262 327 IPR018866 -
Phac7g00247 1041 MobiDBLite consensus disorder prediction 1 22 - -
Phac7g00247 1041 MobiDBLite consensus disorder prediction 53 73 - -
Phac7g00247 1041 SUPERFAMILY Clavaminate synthase-like 582 1016 - -
Phac7g00247 1041 ProSiteProfiles Zinc finger RING-type profile. 267 314 IPR001841 -
Phac7g00247 1041 SMART cupin_9 681 992 IPR003347 -
Phac7g00247 1041 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00247 Phac-Chr7 1177724 1189244 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac7g00247 JmjC 9.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00247 K15601 - gmx:112997634 1424.07