Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00242 ATGGAGAACGACACCACCGCCGCCGCCACCGCTAACAATAACACCGCCGCCGCTGCTAACAACAACACCGCCACCGCGAAAGTAGGTTCTGGAGGAGTGAAATCGAACAATCATAACCTAGAGGAGGAGCATTCCAATTTGAATGGCGAAGAGCACATGGCAGAGCAAGTGGAGGCGGAAGAGGAAGAAGATCGAGAAGCCGATGTTGGCGATGGAGAACCAACTGGATCTGCACCCAATCCTCGCCAACCTTCGCGAACCCCTTTCACTAATCTCAGCCAGGTCGATGCTGACCTCGCTCTCGCTCGAACCCTCCAGGAGCAGGAAAGGGCATATATGATGCTGAGAATGAATAATGAAGGAAGTGATTATGGTAGTTGGGAAGGTGCAAGCTATTTGCATGATGGAGATGATTTTGATGATCTACATGATGGTACTGATGTGGATGATGATGATGATGAGGATGATGATGATGATGATGAAGATGATGATAATGAGGAGTATGAGGATGAAGATGCATTTGATGTCCATGCTCACGCTAGTGCTGGAGAACATGATAATCCCAGCATTGAATTTGACCCAGATGTTTTTTCAAGCGACGAAGCATATGCAAGAGCATTACAGGAAGCTGAAGAGAGGGAGATGGCAGCTAGATTGTTGGCTCTTGCTGGGATAAATGATCGGGAGGCGGAGGACATAGAGGAACATGGTGCTAATTCTCAGGATGCTTGGGAGGACGTTGATCCAGATGAACTTTCATACGAGGAATTACTGGCATTGGGTGAAGTAGTTGGAACTGAGAGCAGAGGTCTTTCAACTGACACTATTGCCTGTTTGCCTTCACTCAACTACAAGATTGGGAGCGATCAGCACGGAAGCAATGATTCGTGTGTCATTTGCCGGGTGGACTTTGAGGATGGTGAATCTTTAACACATCTTTCCTGCAAACATCTGTACCATCCTGAGTGTATCAACAATTGGTTGAAAATAAACAAGGTTTGCCCAGTCTGTAGTACCGAGGTATCTGCTTCTGGGAGCAACTTGTAG 1047 0.4728 MENDTTAAATANNNTAAAANNNTATAKVGSGGVKSNNHNLEEEHSNLNGEEHMAEQVEAEEEEDREADVGDGEPTGSAPNPRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEGASYLHDGDDFDDLHDGTDVDDDDDEDDDDDDEDDDNEEYEDEDAFDVHAHASAGEHDNPSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAEDIEEHGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTIACLPSLNYKIGSDQHGSNDSCVICRVDFEDGESLTHLSCKHLYHPECINNWLKINKVCPVCSTEVSASGSNL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00242 348 FunFam E3 ubiquitin ligase BIG BROTHER-related 263 344 - -
Phac7g00242 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 344 IPR013083 -
Phac7g00242 348 SUPERFAMILY RING/U-box 288 342 - -
Phac7g00242 348 SMART ring_2 297 337 IPR001841 -
Phac7g00242 348 MobiDBLite consensus disorder prediction 78 94 - -
Phac7g00242 348 Coils Coil 40 60 - -
Phac7g00242 348 MobiDBLite consensus disorder prediction 142 171 - -
Phac7g00242 348 ProSiteProfiles Zinc finger RING-type profile. 297 338 IPR001841 -
Phac7g00242 348 Pfam Ring finger domain 295 337 IPR001841 -
Phac7g00242 348 MobiDBLite consensus disorder prediction 1 36 - -
Phac7g00242 348 MobiDBLite consensus disorder prediction 55 69 - -
Phac7g00242 348 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 41 346 IPR043312 -
Phac7g00242 348 MobiDBLite consensus disorder prediction 138 171 - -
Phac7g00242 348 MobiDBLite consensus disorder prediction 1 94 - -
Phac7g00242 348 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00242 Phac-Chr7 1157049 1162134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00242 75 241 C3H Transcription Factor Family AT3G19910 48.128 2.04e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00242 K19045 - gmx:100306465 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00242 7 1157049 1162134 Phac7g00242 7 1157049 1162134 ECH