Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00194 ATGAATTGTTTTGTGGTTTGTCACTCTCGTTTGTGGGTAGTGACCATTGTGTTCTACACGTGTGTTTTCATCCCACTGATGCAACTCAAGAAAAGCATCATGGTCTTCTTCTCTTCTGAGACCAAAGGGGTGCCCACAGACATGGACTTTCCACAAACACCTTCTCTACCTGTGGGAAGGTACCAGGACTTAAAGGGTCATGAGGGTGATGGAGAAAGAGAAGAAATTTGCTCCATTTGCTTGGTGGAGTATGAAGAAGAAGATGCAGTGAGCAAATTGGGAATGTGTGGGCATGTGTTTCATTTCAATTGCATTCATCAATGGATTCTTCGCAATCAATTCTCTTGTCCACTTTGTAGGTCTTTTTTGTTTTCTCCTCCTCATCATCATCTACATGTACAAGCCCAGAATCAGATATAG 420 0.4238 MNCFVVCHSRLWVVTIVFYTCVFIPLMQLKKSIMVFFSSETKGVPTDMDFPQTPSLPVGRYQDLKGHEGDGEREEICSICLVEYEEEDAVSKLGMCGHVFHFNCIHQWILRNQFSCPLCRSFLFSPPHHHLHVQAQNQI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00194 139 ProSiteProfiles Zinc finger RING-type profile. 77 120 IPR001841 -
Phac7g00194 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 125 IPR013083 -
Phac7g00194 139 PANTHER RING ZINC FINGER PROTEIN-RELATED 53 127 - -
Phac7g00194 139 Pfam Ring finger domain 77 120 IPR001841 -
Phac7g00194 139 SUPERFAMILY RING/U-box 67 126 - -
Phac7g00194 139 SMART ring_2 77 119 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00194 Phac-Chr7 929015 929568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00194 9 126 C3H Transcription Factor Family AT4G38140 42.500 3.21e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00194 - - pvu:PHAVU_007G012000g 279.256