Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00188 ATGTGGCACAGCGTTAAAGAGGATCAAATTTCTGGTTTAAAATGTTTGTGTCTTTTGTCTGTTTCTCTCACTTTCTGCTTTTCTGACAACCTTTGTGGACTTCTCTTTCTCCTTCTCTCTCTTCATCAAATCGACAACATCATCATAATCCAGAGCGCAATCATCGTCACAGAGAGAGGGACAAAGCAGAAGAAGAAAAAGAAAGAGATGGTGAACGTGGTGGAGTTGCAGAAACAGCTGCAGAGGTGGCAGCAGAGTGGGAACAATAATGTCAATGTCGATGCCAACGGAGAACTCATGTATGTCCAAGTCATGACTGACGAACAGTTGGAAACTCTCAGGAAACAAATTGCTGTTTATGGCACCATCTGTGATCAACTCATTGAGATGCACAGAACACTCTCAGCCCAACAGGATCTTGCAGGGGTTAGATTGGGAAACCTGTACTGTGATCCACTGATGATATCTGGTGGACACAAAATAACATCCAGACAAAGGTGGACACCTACACCTGTGCAACTTCAGATTCTTGAACGCATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAAGAGATCACTGCTGAACTGGGCCAGCATGGCCAAATTTCTGAAACAAATGTGTACAATTGGTTTCAGAACAGGCGTGCTCGATCCAAAAGAAAACTGCAAAACGTGGCTCCTACCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAAGCTGAGGAGTTTCAGTCCCAACATATCATAGGAGCTGAAAAGCTGTGCTTTCAGAACCCTCAAGTCTACTCTGACTTGCAGTACTTGAATGCTGATTCCAACAAACCATACTCCATGTTCCCATCAGATGCCAGTTTGAAATCCACAAGAAATTTGAGTCATGTGTCTGTTTTTAACCAGGGAGTGAGTATGTAG 945 0.4296 MWHSVKEDQISGLKCLCLLSVSLTFCFSDNLCGLLFLLLSLHQIDNIIIIQSAIIVTERGTKQKKKKKEMVNVVELQKQLQRWQQSGNNNVNVDANGELMYVQVMTDEQLETLRKQIAVYGTICDQLIEMHRTLSAQQDLAGVRLGNLYCDPLMISGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPTNTESEVDTEVDSKDKKTKAEEFQSQHIIGAEKLCFQNPQVYSDLQYLNADSNKPYSMFPSDASLKSTRNLSHVSVFNQGVSM* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00188 314 PANTHER WUSCHEL-RELATED HOMEOBOX 13 82 306 IPR044559 GO:0003700
Phac7g00188 314 Pfam Homeodomain 164 224 IPR001356 GO:0003677
Phac7g00188 314 SMART HOX_1 162 229 IPR001356 GO:0003677
Phac7g00188 314 ProSiteProfiles 'Homeobox' domain profile. 160 225 IPR001356 GO:0003677
Phac7g00188 314 Coils Coil 66 86 - -
Phac7g00188 314 CDD homeodomain 164 225 IPR001356 GO:0003677
Phac7g00188 314 Gene3D - 166 230 - -
Phac7g00188 314 SUPERFAMILY Homeodomain-like 163 226 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00188 Phac-Chr7 898899 901953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00188 73 308 Wox Gene Family AT4G35550 51.311 2.56e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac7g00188 Homeodomain 9.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00188 - - pvu:PHAVU_007G011600g 472.626