Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00175 ATGGCCTACAGTAAACTTACAGGGAATGGACCTGCAACTCCTGATGGTCTTGTACTTGCATCATTGTCTCATGCATTTGGGCTATTTGTGGCGGTTTCTGTGGGGGCAAACATTTCTGGTGGCCATGTGAACCCTGCAGTCACATTTGGTGCTTTCATAGGAGGAAACATAACCCTCTTGAAAAGTATTCTGTATTGGATTGCACAGTTACTTGGTTCAGTTGTTGCTTGCTTTCTTCTCAACTACACTACTGGTGGAATGGAAACAACAGGTTTTTCTCTATCATCTGGGGTGTCAGTGTGGAATGCACTGGTTTTTGAGATTGTGATGACTTTTGGTTTGGTGTACACAGTTTATGCCACAGCAGTGGATCCAAAGAGGGGGAATGTGGGTGTTGTGGCCCCATTAGCAATTGGGCTTGTTGTGGGTGCCAACATCTTGGTTGGTGGGGCTTTTGATGGAGCATCAATGAACCCAGCAGTTTCATTTGGGCCAGCCCTGGTTAGCTGGTCATGGACCCATCACTGGGTCTATTGGTTTGGCCCATTCATTGGTTCAGCTGCTGCTGCCATTCTCTATGATAACATCTTCATTGGTGATGATGGTCATGAACCCCTTGCAGGCAGTGATTTCTAG 636 0.4654 MAYSKLTGNGPATPDGLVLASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLKSILYWIAQLLGSVVACFLLNYTTGGMETTGFSLSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKRGNVGVVAPLAIGLVVGANILVGGAFDGASMNPAVSFGPALVSWSWTHHWVYWFGPFIGSAAAAILYDNIFIGDDGHEPLAGSDF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00175 211 PRINTS Major intrinsic protein family signature 24 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 PRINTS Major intrinsic protein family signature 106 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 PRINTS Major intrinsic protein family signature 139 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 PRINTS Major intrinsic protein family signature 176 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 Pfam Major intrinsic protein 16 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 SUPERFAMILY Aquaporin-like 8 199 IPR023271 -
Phac7g00175 211 Gene3D Glycerol uptake facilitator protein. 1 211 IPR023271 -
Phac7g00175 211 CDD MIP 13 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g00175 211 ProSitePatterns MIP family signature. 42 50 IPR022357 -
Phac7g00175 211 PANTHER AQUAPORIN-8 1 204 IPR034294 -
Phac7g00175 211 FunFam Probable aquaporin TIP1-1 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00175 Phac-Chr7 851669 853576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00175 1 211 Major Intrinsic Protein MIP AT4G01470 81.991 2.45e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00175 K09873 - gmx:100788583 392.119