Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00170 ATGGAAGAGAAAGCAGAAAGAATGCAGAAGCCAAAAGAAGGAACTGAAGAAGGAAGAGAGGAACAGATATCTGAGGCTGCAAATGCAGAGATACCATCTGCTGTTACAAATTGTCTGTTCATCAGTGGAGCACTGGCTGCAAGTTCTACCTACACACTGCAACGCTTGGGAATCACACATATTGTTTGTTTATGTACAAACCAAATTGGCCAATTAGATTCTCAGTTTCCTGATATATTCACATACAAAAATTTCGATGTGTTTGACAATGAAGATTTTAACATCAGTAGCATATTTGAAGAGGCTTGTGATTTTATAGATTGTGTTGAGAAAGCTAGTCAAAGTGTTTTAGTTCATTGTTTTGAGGGGAAAAGCAGAAGTGTGACTTTGGTCCTTGCTTACTTGATGCTTAGGAAGAAATTGACTTTGTTAGAAGCATGGAATACTCTAAAGCGAGTTCATCCTCGATCTCAGCCCAACCATGGTTTTGCAAAGATCTTAGTTGAACTAGACCAGAAACTCCATGGCAAGGTTTCAATGGAGTTGCAGCAAAGGAAACAAAGGAGACCAATGATGAAAATTTGTTCCATCTGTGGCAAGAATGTTGGACTAAGTAGTAGTTCCCTTAAACTCCACCTTCGCAAATCACATGCAGAGTTGTCATGA 666 0.3919 MEEKAERMQKPKEGTEEGREEQISEAANAEIPSAVTNCLFISGALAASSTYTLQRLGITHIVCLCTNQIGQLDSQFPDIFTYKNFDVFDNEDFNISSIFEEACDFIDCVEKASQSVLVHCFEGKSRSVTLVLAYLMLRKKLTLLEAWNTLKRVHPRSQPNHGFAKILVELDQKLHGKVSMELQQRKQRRPMMKICSICGKNVGLSSSSLKLHLRKSHAELS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00170 221 SMART ptp_7 81 193 IPR003595 -
Phac7g00170 221 CDD DSP 32 169 - -
Phac7g00170 221 Gene3D Protein tyrosine phosphatase superfamily 1 177 IPR029021 -
Phac7g00170 221 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 21 221 IPR035010 GO:0004721|GO:0009737|GO:0043622
Phac7g00170 221 SMART dsp_5 31 173 IPR020422 GO:0006470|GO:0008138
Phac7g00170 221 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 32 176 IPR029021 -
Phac7g00170 221 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g00170 221 Pfam Dual specificity phosphatase, catalytic domain 47 172 IPR000340 GO:0008138|GO:0016311
Phac7g00170 221 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 96 155 IPR000387 GO:0016311|GO:0016791
Phac7g00170 221 ProSiteProfiles Dual specificity protein phosphatase domain profile. 31 176 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00170 Phac-Chr7 834615 837932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00170 23 221 Protein tyrosine phosphatase (PTP) family AT5G23720 65.327 2.20e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00170 K14165 K17614 gmx:102661225 318.161