Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00133 ATGCCGTTTCGAGCTCGCACTGCAACTGCAAGCTTTCGGTTGTCTCTTCATTCTCTTCACCTTGGCTTCTGTTCTCTGGCTCTGTCAAAACCTCACCAGTTTTCTGCCAATTGCCACGAATTTTTGCCATGGTTGGAGCGGAAAGCTGCTTCTGCAGTTTCCTCCTCGCTTTTCATCGGGAAATCTTCTTATGGAAGGTCTCTGTTTGCTTCCAAGACAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCTGATAATCTCCCTCCTGAAATCAAATCTTTGATCGGTGAGCAAGTTGGAGATATTGCGAAACTTGCTATTGTTATTCTCACTGAGAAGAAATTGGGTCAGGGCTCTGAATGGTATCCTTATATCAGCTGTCTTCCACAGCTAAGGGAGCTGCACAATACGGTATTTTGGAATGAAAGTGAGCTGGAAATGATTCGTCCAAGTTCAGTTTATCAGGAAACTATTGACCATAGGTCTCAAATTGAAAAGGACTTTTTGACAATCAAGCGTGTTTTTGAATCTGTCCATATAAGTTTTGAAGATTTTACTTTCAAGGACTTCATGCATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAATGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCACGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATGCTCAGAAATTATTGCTGATCGTGACTATGCCCCTGGTGAACAGGTCCTAATAAGATATGGAAAGTTTTCAAATGCTACACTAGTGCTGGACTTTGGTTTTACAGTTCCATACAACATTTACGATCAGGTTAAGATCCAGTTTGATGTACCTAAGCATGATCCTTTGCATGACATGAAGTTGGAGCTCTTGCATCGAAACATTGTACCTCATCATCCTAAAGATACGAAGGACTTGACATATCCTGTGAATACCTTCAGTATCAAGTTTGTACTGATTCCTAATTTGTTATTCGTCTTGCAGAATCATTTAGATAACATAGTCCAATTTTGGTACGCTGATTCTTGGTATTGGGTTCTTTTGACCGACATAATAGAATTATTTTGCTTTATGAATCCAAATATCCCTTGTTACTCATGA 1143 0.3981 MPFRARTATASFRLSLHSLHLGFCSLALSKPHQFSANCHEFLPWLERKAASAVSSSLFIGKSSYGRSLFASKTIQTGDCILKVPYRVQITADNLPPEIKSLIGEQVGDIAKLAIVILTEKKLGQGSEWYPYISCLPQLRELHNTVFWNESELEMIRPSSVYQETIDHRSQIEKDFLTIKRVFESVHISFEDFTFKDFMHACTLVGSRAWGSTNGLALIPFADFLNHDGVSEAIVMSDDDKQCSEIIADRDYAPGEQVLIRYGKFSNATLVLDFGFTVPYNIYDQVKIQFDVPKHDPLHDMKLELLHRNIVPHHPKDTKDLTYPVNTFSIKFVLIPNLLFVLQNHLDNIVQFWYADSWYWVLLTDIIELFCFMNPNIPCYS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00133 380 Gene3D - 278 330 IPR036464 -
Phac7g00133 380 Gene3D set domain protein methyltransferase, domain 1 34 276 - -
Phac7g00133 380 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 32 312 - -
Phac7g00133 380 Pfam SET domain 65 262 IPR001214 GO:0005515
Phac7g00133 380 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 34 275 - -
Phac7g00133 380 SUPERFAMILY SET domain 38 280 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00133 Phac-Chr7 646165 653903 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac7g00133 SET 4.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00133 K19199 - gmx:100818002 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00133 7 646165 653903 Phac7g00133 7 646165 653903 ECH