Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00132 ATGCCGTTTCGAGCTCGCACTGCAACTGCAAGCTTTCGGTTGTCTCTTCATTCTCTTCACCTTGGCTTCTGTTCTCTGGCTCTGTCAAAACCTCACCAGTTTTCTGCCAATTGCCACGAATTTTTGCCATGGTTGGAGCGGAAAGCTGCTTCTGCAGTTTCCTCCTCGCTTTTCATCGGGAAATCTTCTTATGGAAGGTCTCTGTTTGCTTCCAAGACAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCTGATAATCTCCCTCCTGAAATCAAATCTTTGATCGGTGAGCAAGTTGGAGATATTGCGAAACTTGCTATTGTTATTCTCACTGAGAAGAAATTGGGTCAGGGCTCTGAATGGTATCCTTATATCAGCTGTCTTCCACAGCTAAGGGAGCTGCACAATACGGTATTTTGGAATGAAAGTGAGCTGGAAATGATTCGTCCAAGTTCAGTTTATCAGGAAACTATTGACCATAGGTCTCAAATTGAAAAGGACTTTTTGACAATCAAGCGTGTTTTTGAATCTGTCCATATAAGTTTTGAAGATTTTACTTTCAAGGACTTCATGCATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAATGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCACGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATGCTCAGAAATTATTGCTGATCGTGACTATGCCCCTGGTGAACAGGTCCTAATAAGATATGGAAAGTTTTCAAATGCTACACTAGTGCTGGACTTTGGTTTTACAGTTCCATACAACATTTACGATCAGGTTAAGATCCAGTTTGATGTACCTAAGCATGATCCTTTGCATGACATGAAGTTGGAGCTCTTGCATCGAAACATTGTACCTCATCATCCTAAAGATACGAAGGACTTGACATATCCTGTGAATACCTTCAGTATCAAGGAGGTGAAGTCAGATAGAGGAAAAGGGAAGGGTCTTCCACAGTCACTTCGTGCGCTTGCTCGTGTTCTTTCTTGTACCACATCTCAGGAACTTGACGATTTGGTCGAGGAAGCTGCTCAAAATGATGGCAGGCTAGCTAGGCGCCCTTTAAAGGATATCACCAAAGAGATACAAGCACACCTGATGTTGTTATCGGTATTCATCCAATTAATTGAGGAGCGCAATGAGACTATTATGTCACTGGGTTCTTGCCATTGCCCTCCCTTCTGTGAAAGACTTTTTGTTAGAAGAGTAATGGCTGAAGATCTTCTATTCGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCCTGGCTGGAGAACTACTGTTTCTCCTTGACTTGTTGA 1374 0.4221 MPFRARTATASFRLSLHSLHLGFCSLALSKPHQFSANCHEFLPWLERKAASAVSSSLFIGKSSYGRSLFASKTIQTGDCILKVPYRVQITADNLPPEIKSLIGEQVGDIAKLAIVILTEKKLGQGSEWYPYISCLPQLRELHNTVFWNESELEMIRPSSVYQETIDHRSQIEKDFLTIKRVFESVHISFEDFTFKDFMHACTLVGSRAWGSTNGLALIPFADFLNHDGVSEAIVMSDDDKQCSEIIADRDYAPGEQVLIRYGKFSNATLVLDFGFTVPYNIYDQVKIQFDVPKHDPLHDMKLELLHRNIVPHHPKDTKDLTYPVNTFSIKEVKSDRGKGKGLPQSLRALARVLSCTTSQELDDLVEEAAQNDGRLARRPLKDITKEIQAHLMLLSVFIQLIEERNETIMSLGSCHCPPFCERLFVRRVMAEDLLFGELRILKSASAWLENYCFSLTC* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00132 457 Gene3D - 278 451 IPR036464 -
Phac7g00132 457 Pfam Rubisco LSMT substrate-binding 293 441 IPR015353 -
Phac7g00132 457 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 32 391 - -
Phac7g00132 457 Pfam SET domain 65 262 IPR001214 GO:0005515
Phac7g00132 457 Gene3D set domain protein methyltransferase, domain 1 34 276 - -
Phac7g00132 457 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 34 275 - -
Phac7g00132 457 SUPERFAMILY SET domain 38 280 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00132 Phac-Chr7 646165 653903 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac7g00132 SET 7.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00132 K19199 - gmx:100818002 715.687