Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00054 ATGCCGAGCTTCAATTCAAAATTGCCCAATTCCAATGCATGCTGTACAGAGGGAAGCACAGTTGATTCTTTTCGTGTGTCTGACTTTGATCAATCTGTTGGATATCGCATAGAGGATGCTGTTGCCTTGAGTGGAAACTCAATTTTTGACTCACTTAAAGTAAGTAGCCAAACAATTTCTCGAGGTCCTGTTCAACTTGGTTCCTTTGATATTTTGCCAACTTCACTTGACAAAAGCCCATTAACAAATCAAACAGAGCGGGGAAGCTTGCAATTCCAAAAGTTCCACTCATCAAATTTGGTTACTGGTGATACAGAACACCAGGAAGAGTTTGCCATGGCTGATGCTAGTCCCAGAACTGATATTTCTACAGATGCTGACACTGACGATAAGAATCCACAGTTTGATAGAAGTCAGGCCCTTGTTGCTGCGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGACTCTCCGCAGGCTAGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGACTGAGAAAGAAAGCTTATGTTCAGCAGCTGGAAAGCAGTCGTTTAAAGCTGACCCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTTATATCAAGTTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCCATGGCATTTGACGTAGAATATGCAAGGTGGGTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCACGCAGCTGAGAGGTGTTTCCTTTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGCAGCAGTTAGTGGGTATCACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAGCAGTCCCTTTCGGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGCAAATTAGGGACACTTGAGGGGTTCATTAAGCAGGCTGACAATTTGCGGCAGCAAACACTGCAACAAATTCATCGGATATTGACAACTCGGCAATCGGCTCGTGCACTGCTTGCAATTCATGACTACTTTTCTAGGCTGCGTGCTCTCAGCTCTCTTTGGCTTGCTCGCCCAAGAGACTGA 1209 0.4607 MPSFNSKLPNSNACCTEGSTVDSFRVSDFDQSVGYRIEDAVALSGNSIFDSLKVSSQTISRGPVQLGSFDILPTSLDKSPLTNQTERGSLQFQKFHSSNLVTGDTEHQEEFAMADASPRTDISTDADTDDKNPQFDRSQALVAAASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMAFDVEYARWVEEQNRQINELRAAVNSHAAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00054 402 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Phac7g00054 402 FunFam BZIP family transcription factor 158 207 - -
Phac7g00054 402 CDD bZIP_HBP1b-like 159 211 - -
Phac7g00054 402 Pfam bZIP transcription factor 159 199 IPR004827 GO:0003700|GO:0006355
Phac7g00054 402 Coils Coil 178 205 - -
Phac7g00054 402 Gene3D - 158 207 - -
Phac7g00054 402 Coils Coil 235 255 - -
Phac7g00054 402 ProSiteProfiles DOG1 domain profile. 174 399 IPR025422 GO:0006351|GO:0043565
Phac7g00054 402 MobiDBLite consensus disorder prediction 110 161 - -
Phac7g00054 402 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Phac7g00054 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Phac7g00054 402 PANTHER TRANSCRIPTION FACTOR TGA9 253 401 - -
Phac7g00054 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Phac7g00054 402 Pfam Seed dormancy control 243 274 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00054 Phac-Chr7 347082 354473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00054 113 402 bZIP Transcription Factor Family AT3G12250 70.482 6.45e-152 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac7g00054 DOG1 5.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00054 K14431 - gmx:100816123 627.861