Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00048 ATGGCTGATGCTAGTCCCAGAACTGATATTTCTACAGATGCTGACACTGACGATAAGAATCCACAGTTTGATAGAAGTCAGGCCCTTGTTGCTGCGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGACTCTCCGCAGGCTAGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGACTGAGAAAGAAAGCTTATGTTCAGCAGCTGGAAAGCAGTCGTTTAAAGCTGACCCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTTATATCAAGTTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCCATGGCATTTGACGTAGAATATGCAAGGTGGGTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCACGCAGGTGATACAGAACTCTGCATGATTATCGATGGTGTAATGGCACATTATGATGAGATATTTAGGCTGAAGGGCAATGCAGCTAAGGCTGATGTCTTTCATTTGTTGTCTGGCATGTGGAAAACACCAGCTGAGAGGTGTTTCCTTTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGCAGCAGTTAGTGGGTATCACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAGCAGTCCCTTTCGGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGCAAATTAGGGACACTTGAGGGGTTCATTAAGCAGGCTGACAATTTGCGGCAGCAAACACTGCAACAAATTCATCGGATATTGACAACTCGGCAATCGGCTCGTGCACTGCTTGCAATTCATGACTACTTTTCTAGGCTGCGTGCTCTCAGCTCTCTTTGGCTTGCTCGCCCAAGAGACTGA 999 0.4725 MADASPRTDISTDADTDDKNPQFDRSQALVAAASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMAFDVEYARWVEEQNRQINELRAAVNSHAGDTELCMIIDGVMAHYDEIFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00048 332 Gene3D - 46 95 - -
Phac7g00048 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Phac7g00048 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Phac7g00048 332 Coils Coil 123 143 - -
Phac7g00048 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Phac7g00048 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Phac7g00048 332 Coils Coil 66 93 - -
Phac7g00048 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Phac7g00048 332 MobiDBLite consensus disorder prediction 1 48 - -
Phac7g00048 332 FunFam BZIP family transcription factor 46 95 - -
Phac7g00048 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Phac7g00048 332 PANTHER TRANSCRIPTION FACTOR TGA9 19 331 - -
Phac7g00048 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00048 Phac-Chr7 346870 354473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00048 1 332 bZIP Transcription Factor Family AT3G12250 80.422 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac7g00048 DOG1 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00048 K14431 - gmx:100816123 558.14