Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00031 ATGAATGGGGACGTGGTTGAAAAAAAAGTGGCACGTGACCCAAATGCCACTCAGCCAATACAATTGCAGAATGCTGATGCAGCCTTAAAGTATTCCACAAGTGGCATACACCCACCAATGCCATCGCATCTATCTCTATCTAAATTGCTTATTGCACCTTCCTTTTCTAACCCAACCAAACCAAACCTTCTTCTGCTTTCTTCTGCTTTCTCCTCCATGTATCCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTCACTCCATGAGCCACGCGCCTACAGGCCTCACGCGCTACGGCTCCGCTCCTGGCTCTCTCCTCACCACCACCGTCGACGCCCTCATCGGAGGATCACGCCCCAACCCCACCCCTTACTATTCCGGAGGAGACTCTTCCGACTCCACCTGCAAGGACCAAACGTCGTATCACAACCACGCCCTCGGATCCGCCTTACTCCGTCAGAAAAGCTCTCCCGCCGGCTTCCTCTCCCATCTCGCCGCCTCCGCCGCCGCCACCACCAACCATAACCACAACCACACGCTCAATGGAGCGGGGTTCACCATCACGCGGGGCTCTCGGTTGAAGTCGCAGTTGAGCTTCACGGGTCACTGCCAAGAATCTCTGTGTGGCGGCGATAACAGTAACAATTTGGTGCTCGGCGACCATGCCAGCTTCGGAATGGAGCCGTGGGACGGTTCTCATTCTCATTCCAATTCCATCGCCTTTTCCACTCCCCCGCCGAAGCGCTCCAAAAACTCCAACTCCACCGATCAAGACATTCTCCATTGCCTCAACGCCTTGGAATCGCAGTTCAGTCTTCCTCAGACCACTCTCGAAATGGCGACGGTTGAGAAGCTCCTGCACATTCCTGAAGATTCCGTCCCTTGCAAAATCCGCGCTAAGCGAGGCTGTGCTACTCATCCCCGCAGCATTGCAGAGCGGGAGAGAAGAACCAGAATTAGTGGAAAGCTCAAGAAATTACAGGACCTTGTACCTAATATGGATAAGCAAACAAGCTATGCAGACATGCTCGATTTGGCCGTTCAGCATATTAAAGGTCTTCAAACACAGGTTCAGGCTTTTTACCAACCCCTCGTGGATGAGGAGTATTAA 1116 0.5332 MNGDVVEKKVARDPNATQPIQLQNADAALKYSTSGIHPPMPSHLSLSKLLIAPSFSNPTKPNLLLLSSAFSSMYPSSSSSSSSSSSSHSMSHAPTGLTRYGSAPGSLLTTTVDALIGGSRPNPTPYYSGGDSSDSTCKDQTSYHNHALGSALLRQKSSPAGFLSHLAASAAATTNHNHNHTLNGAGFTITRGSRLKSQLSFTGHCQESLCGGDNSNNLVLGDHASFGMEPWDGSHSHSNSIAFSTPPPKRSKNSNSTDQDILHCLNALESQFSLPQTTLEMATVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQAFYQPLVDEEY* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00031 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 355 IPR011598 GO:0046983
Phac7g00031 371 MobiDBLite consensus disorder prediction 77 141 - -
Phac7g00031 371 CDD bHLH_AtbHLH_like 310 360 IPR045239 -
Phac7g00031 371 MobiDBLite consensus disorder prediction 235 257 - -
Phac7g00031 371 Gene3D - 302 364 IPR036638 GO:0046983
Phac7g00031 371 SMART finulus 311 361 IPR011598 GO:0046983
Phac7g00031 371 MobiDBLite consensus disorder prediction 77 117 - -
Phac7g00031 371 Pfam Helix-loop-helix DNA-binding domain 310 356 IPR011598 GO:0046983
Phac7g00031 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 308 364 IPR036638 GO:0046983
Phac7g00031 371 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 91 360 - -
Phac7g00031 371 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00031 Phac-Chr7 252699 254242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00031 152 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 53.982 6.63e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00031 HLH 5.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00031 - - vra:106771988 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00031 7 252699 254242 Phac7g00031 7 252699 254242 ECH
Phac1g01929 1 29052999 29056169 Phac7g00031 7 252699 254242 ECH