Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00018 ATGGAGAGAGAGAGGGAGGTGGTGAGTGTGCTGCACGGTGCTATGGTGATAACCATGGACGAGGAGCAGCGAGTGTTTAGGGACGGGGGAATCGTGATCGAAGGAGATAGAATCAAAGCAATTGGACAATCTGCTGAAATTCTTGCTCAATTTTCTGGTGTGGCCGAACACATCCTCGATCTCAGCGGCCATATCTTACTCCCTGGATTTATTAACACCCACGTGCATACTTCGCAGCAACTGGCGAGAGGCATAGCCGATGATGTGGACTTGATGACCTGGTTGCATGACCGCATCTGGCCTTACGAATCCAACATGACCCAACACGATTCTTACCTCTCTACTTTGCTTTGCGGGATCGAACTCATTCACTGCGGCGTAACCTGTTTTGCTGAAGCTGGGGGTCAACATGTTTCCGGAATGGCTCGAGCATCTCAAAAGGATAATTATGACAAGTACCACAACACAAGTGAAGGCCGCATCAGAATCTGGTTCGGAATACGGCAAATCATGAACTCTACTCCTCACTTGCTTATTCAAACAAGAGATGCTGCAGCACAACTCAAAACTGGAATTCACATGCATGTTGCAGAGATACCATATGAGAACCAACTGGTCAGGGATGTTCACAAAGTAGATCACGGAACTGTTACATACTTGGACAAGATAGATTTCCTTCAAAGCAATCTGCTAGCAGCTCACTCGGTTTGGATTGATAATAACGAGATATCTCTTCTTTCAAGATCAGGGGTCAAAGTGTCCCACTGTCCTGCTGCTGCAATGCGAATGCTTGGATTTGCACCTGTAAGGGAGATGCTTGATGCTGGCATTTGTGTCTCCCTGGGAACTGATGGGGCCCCATCAAACAATCGCATGAGCATTGTTGATGAAATGTACCTAGCTTCTCTAATCAATAAAGGACGGGAAGTTTATGCTAATGGAACTACAGATCCAACTGCATTGCCCGCTGAAACGATTCTTAGAATGGTTACAGTTAATGGTGCAAAGTCGGTATTATGGGATGATGAACTAGGTTCTCTTGAGGTTGGGAAAAAGGCGGACATTGTTGTAGTCAATCCTTCCTCTTGGCCTATGGTTCCTGTTCATGACTGCATTTCCAGCATAGTGTATTGCATGCGATCAGAAAATGTGGTATCTGTCATGTGCAATGGCTCATGGATAATGAAGAACAAGAAGATTATAAACGTGGACGAGTGGCAGTTGCAGACTCAATCCATGGCAGCTGCATTTGCATCTTCGACTCCCTCATTGAGACTGTCAAATTTTGGAGAAATCAAAGGTTTGCACCTCCCTAACCCTAATCCTAATAACCTCAAGCTCAGGAGGCGGTGGTCTGGGTTTGGCGGTTCTTATGGAGTGACATTGACTGTGAGAGAAAGGACCGTTGGAAGGGGTTTGAGGGTTCGTGCGAGTTCTTCTTCTTCGGGGGACGACGCAATTGTTCAGGCCAAAGTCACTCAGAAAGTGTTCTTCGACATCGGTATCGGAAATCCAGTTGGGAAGCTTGCGGGAAGGGTTGTGATTGGACTGTATGGCGACGATGTTCCCCAAACAGCTGAGAACTTCCGCGCCCTCTGCACCGGAGAGAAGGGCTTTGGCTATAAGGGCTCTTCCTTCCATCGTGTCATCAAGGATTTCATGATTCAAGGAGGCGATTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATATGGTCGCACTTTCAAAGATGAGAATTTTGTTTTGTCTCATACTGGACCCGGGGTTGTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGACACCATGGTTGGATCAGAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTGGTCGAATCCCAGGAGACAGATAGGGGTGACCGTCCTAAGAAAAAGGTGACCATCATCGACTGCGGTGAGCTTCCAATTGCTTGA 1986 0.4668 MEREREVVSVLHGAMVITMDEEQRVFRDGGIVIEGDRIKAIGQSAEILAQFSGVAEHILDLSGHILLPGFINTHVHTSQQLARGIADDVDLMTWLHDRIWPYESNMTQHDSYLSTLLCGIELIHCGVTCFAEAGGQHVSGMARASQKDNYDKYHNTSEGRIRIWFGIRQIMNSTPHLLIQTRDAAAQLKTGIHMHVAEIPYENQLVRDVHKVDHGTVTYLDKIDFLQSNLLAAHSVWIDNNEISLLSRSGVKVSHCPAAAMRMLGFAPVREMLDAGICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVYANGTTDPTALPAETILRMVTVNGAKSVLWDDELGSLEVGKKADIVVVNPSSWPMVPVHDCISSIVYCMRSENVVSVMCNGSWIMKNKKIINVDEWQLQTQSMAAAFASSTPSLRLSNFGEIKGLHLPNPNPNNLKLRRRWSGFGGSYGVTLTVRERTVGRGLRVRASSSSSGDDAIVQAKVTQKVFFDIGIGNPVGKLAGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFVLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLVESQETDRGDRPKKKVTIIDCGELPIA* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00018 661 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 541 558 IPR020892 GO:0003755|GO:0006457
Phac7g00018 661 Pfam Amidohydrolase family 65 393 IPR006680 GO:0016787
Phac7g00018 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 604 616 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 589 604 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 517 532 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 546 558 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 617 632 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 507 657 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 SUPERFAMILY Metallo-dependent hydrolases 68 346 IPR032466 -
Phac7g00018 661 Gene3D - 70 379 - -
Phac7g00018 661 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 510 656 IPR002130 GO:0000413|GO:0003755
Phac7g00018 661 CDD ATZ_TRZ_like 10 400 - -
Phac7g00018 661 CDD cyclophilin_ABH_like 495 656 - -
Phac7g00018 661 PANTHER AMINOHYDROLASE SSNA-RELATED 145 418 - -
Phac7g00018 661 Gene3D - 481 660 IPR029000 -
Phac7g00018 661 FunFam Peptidyl-prolyl cis-trans isomerase 482 661 - -
Phac7g00018 661 SUPERFAMILY Cyclophilin-like 488 658 IPR029000 -
Phac7g00018 661 SUPERFAMILY Composite domain of metallo-dependent hydrolases 10 410 IPR011059 GO:0016810
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00018 Phac-Chr7 155337 165462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00018 511 655 U-box Gene Family AT5G67530 47.945 4.72e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00018 - - gsj:114403660 722.62