Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03206 ATGGCTTCCGCTGCGCCAGGTGCAACCAATGATGCTTTATACAAGGAATTGTGGCATGCCTGTGCTGGACCCCTTGTCACTCTTCCGCGTGAAGGGGAGAGAGTTTATTACTTCCCCCAAGGTCATATGGAACAGCTCGAGGCATCTATGAATCAGGGATTGGAGCAGCAAATGCCTTCCTTTAATTTGCCTTCTAAAATATTATGTAAAGTGGTCAATGTTCATCTTCGAGCTGAACCTGAAACAGATGAAGTATATGCACAAATAACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGACAAGCCCTGACGATCCTCTACCAGAACCTCCAAGATGTACTGTTCATTCATTTTGCAAGACACTCACAGCTTCTGACACTAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCAGATGATTGTCTGCCACCGCTGGATATGACGCAGCAGCCACCATGGCAAGAATTGGTTGCAACTGATTTGCATGGCAATGAATGGCATTTTAGACATATTTTTCGAGGGCAACCCAGGCGCCACTTACTGACCACTGGGTGGAGTGTCTTTGTCAGTTCCAAAAAGTTAGTGGCTGGTGATGCATTTATATTCTTAAGGGGTGAAAATGGAGAGCTGCGAGTTGGAGTTAGGAGGCTCATGAGACAGCAAAGCAACATGCCATCTTCTGTTATATCTAGTCATAGTATGCATCTGGGTGTGCTGGCCACTGCATCTCATGCCATTGCCACAGGAACCTTGTTTTCTGTATTTTATAAGCCCAGAACTAGCCGGTCTGAGTTTATTGTGAGTGTCAACAAGTATCTTGAAGCTCAAAGTCATAAACTTTCTGTTGGGATGAGATTCAAAATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTTAGTGGTACGATTGTGGGTGTTGGAGATAATAAATCGTCAGTCTGGACTAATTCTGAGTGGAGATCATTAAAGGTTCAATGGGATGAACCATCTTCTATTTTACGTCCTGATAGAGTTTCTCCATGGGAGTTGGAGCCACTTGTGTCTACCCCTCCCACAAACTCCCAGCCATCCCAAAGAAACAAGAGATCACGGCCTCATGTTCTTCCTTCAACAATGCCTGATTCTTCTATGCAAGGTGTACGGAAATCATCAGTTGATTCTGCACCATTCTCTTATCGTGACCATCAACACGGGCAAGACATCTATCCACCGGCCAAATTCAATTCTACTGCAACTGGCTTCCTTGGTTTTGGTGGGAATTGTTCTGCTTCCAACAAATCAATATTTTGGTCTAGTAGGACGGAAAACTCTACAGAATCTTTTTCACCTGTAGCACTTAAAGAATCTGGAGAGAAGAGACAAGGGGCTGCAAATGGCTGTAGGCTCTTTGGGATTCAGTTACTTGATAATTGCAATGGGGAAGAAAATCTACCAATGGTCAATTTGTCAGGAAGGGTGGGTGATGATGGCCCCCTTCCATCTTTGGATGCTGAGTCTGACCAGCATTCTGAACCATCAAATATTAATCGATATGATATTCCTTCGGTAAGTTGTGATGCTGAAAAATCATGCTTGCGGTCTCCCCAGGAGTCTCAAAGTAGGCAAATAAGAAGCTGCACAAAGGTAGTATTATTTATTTGTGTTGGTGTTGGCATAATTTTCTGA 1674 0.4385 MASAAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVWTNSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNSQPSQRNKRSRPHVLPSTMPDSSMQGVRKSSVDSAPFSYRDHQHGQDIYPPAKFNSTATGFLGFGGNCSASNKSIFWSSRTENSTESFSPVALKESGEKRQGAANGCRLFGIQLLDNCNGEENLPMVNLSGRVGDDGPLPSLDAESDQHSEPSNINRYDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVVLFICVGVGIIF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03206 557 ProSiteProfiles B3 DNA-binding domain profile. 118 220 IPR003340 GO:0003677
Phac6g03206 557 MobiDBLite consensus disorder prediction 347 395 - -
Phac6g03206 557 Gene3D - 115 220 IPR015300 -
Phac6g03206 557 FunFam Auxin response factor 116 220 - -
Phac6g03206 557 MobiDBLite consensus disorder prediction 349 388 - -
Phac6g03206 557 Pfam B3 DNA binding domain 118 218 IPR003340 GO:0003677
Phac6g03206 557 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 545 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac6g03206 557 SMART B3_2 118 220 IPR003340 GO:0003677
Phac6g03206 557 MobiDBLite consensus disorder prediction 486 512 - -
Phac6g03206 557 SUPERFAMILY DNA-binding pseudobarrel domain 107 247 IPR015300 -
Phac6g03206 557 Gene3D - 281 353 - -
Phac6g03206 557 FunFam Auxin response factor 281 353 - -
Phac6g03206 557 Pfam Auxin response factor 244 326 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac6g03206 557 CDD B3_DNA 116 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03206 Phac-Chr6 27047175 27053179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03206 7 545 B3 DNA Binding Superfamily AT1G59750 72.711 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac6g03206 B3 9.4e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03206 K14486 - gmx:100793224 1048.88