Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03198 ATGTGTGCCATCCGCCAATGGGTTTGGCCTAAACCCTGTAAATGGGTGAAGGGAAAACTGATTGGATGTGGATCTTTCGGCACTGTTCATTTGGCGATGAACAAATCCACGGGTTCCCTTTTTGTAGTAAAATCATCAAATTCCAGGGCTGGACGTGAGGCTTTGGATGAAGAGGTCAAAATTCTCAACACATTGAATTCTGATCACATTGTCCGGTATTTAGGGGCAGAGGAGGAGCAGGGCAAACTGAACGTTTTCATGGAGTATATGGCAGGAGGTAGTTTGGCAGACGTGGCTCTCAAGTTCGGTGGGTCATTGGATGAAGAGGTGGTTCGGGTTTACACCAGGGAAATTCTTCACGGGCTAAACTATCTTCACCTTCATGGAATTGCACACTGCGATCTCAAGTGCAAGAACGTGCTTTTGGGTCCACCTGGGAATGTCAAGTTGGCTGATTTTGGATGTGCCAGAAGGGTTAAGGACTTGGTAAAGTCCAGTGGTGGGACCCCTCTTTGGATGGCTCCTGAAGTGCTGAGGAACGAGTCTGTGGATTTGTCTGCAGATATATGGTCCTTGGGATGCACAGTTATTGAGATGGCTACTGGCACGCCTCCTTGGGCTCATGATGTTTCAAATCACATTGGTGCTGTGCTCAAGATTGCTCATGGTGATGGTATACCTCAGTTTCCACCCCATTTCTCCAAGGAGGGTTTGGATTTCTTGAGCATGTGCTTGCAGAGAGACCCCAGTAAGAGACCTACAGCTGAGCAGTTACTTACTCATCCCTTTGTTACCTCAACACCTTCTCAACAGCAGCCTGCTTTCTCACCCGCAAGCGTCTTGGAGGTTCACAATTTCAAAGACTCTTGTGACATGGATGAATTAGAAAGTTCAGTGGGGGATGATTTCTCATTTACAGACACATTTGCATCTCACAGTGATTACTCCAACGGAACACCAGTATGTAAAGCGGAAGACAGTGCTTTGGGCTCTTCAGGGAATTGGATTACAGTTAGATCAGGCTGA 1026 0.4708 MCAIRQWVWPKPCKWVKGKLIGCGSFGTVHLAMNKSTGSLFVVKSSNSRAGREALDEEVKILNTLNSDHIVRYLGAEEEQGKLNVFMEYMAGGSLADVALKFGGSLDEEVVRVYTREILHGLNYLHLHGIAHCDLKCKNVLLGPPGNVKLADFGCARRVKDLVKSSGGTPLWMAPEVLRNESVDLSADIWSLGCTVIEMATGTPPWAHDVSNHIGAVLKIAHGDGIPQFPPHFSKEGLDFLSMCLQRDPSKRPTAEQLLTHPFVTSTPSQQQPAFSPASVLEVHNFKDSCDMDELESSVGDDFSFTDTFASHSDYSNGTPVCKAEDSALGSSGNWITVRSG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03198 341 SUPERFAMILY Protein kinase-like (PK-like) 11 304 IPR011009 -
Phac6g03198 341 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phac6g03198 341 ProSiteProfiles Protein kinase domain profile. 15 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03198 341 SMART serkin_6 15 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03198 341 Gene3D Transferase(Phosphotransferase) domain 1 13 316 - -
Phac6g03198 341 Pfam Protein kinase domain 16 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03198 341 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 12 277 - -
Phac6g03198 341 CDD STKc_MAPKKK 14 264 - -
Phac6g03198 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03198 Phac-Chr6 27005703 27007370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03198 12 265 MAP Kinase Kinase Kinase AT1G54960 46.097 1.22e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac6g03198 Pkinase 9.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03198 - K20716 gmx:100804518 470.7