Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03152 ATGGAACTATCAGATTTGCAAAACAACAAGCAGAACACCACCACCAACACAGACAACAATAACAACACCAACAACACCAACACAAAAACAAACACAGTACGAGGAGGAGGTGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTGGTAGTGCTGCTACTCATCCTCGTCCCCAACCCAACCATCACCACCAACAATCTTCTTCTTCCCATCTTCAGCTCCCTTTTGATGCCAGGACAAACCCTTCATCCACCTTCCTCTCTTCCTCCACCTCTTCTTCTTCTTCCAATTCTTCCTCCTCTTCCTCCTCCGCCTCCGCCTCTTCCCACATCATCGATGCCTCCCTAGCCATCGCCACCAGATCTGATGATTCCGCCAACAAGACCCAACAGCTCTCCACCGCCGCCGCCGCCGCCAACCCTCCCAAGCGATCCACCAAGGACAGGCATACCAAAGTCGACGGCCGCGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCCAGGGTTTTCCAATTGACCAGAGAATTGGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCCATCATCGCCGCCACCGGAACGGGCACCATCCCCGCTAATTTCTCCACGCTCAACGTCTCGTTCCGCAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCGAAGTCGGCCCCGCACACCTTTCACGGCGCGCTCGCACTCGCTCACCACCCTTACGAGGAAGCCTTTCAACACACCGCTCTGCTTGGCTTCCACGCTCACGCTCACCAGCAGCACCAGCTTCTTTCCGCAGATCAAATCGCGGAAGCGCTTCCCAGCGGTGGCGGTGACTCCGGCGACGGCTATCTCAGGAAACGCTACCGAGAAGATCTGTTCAAAGACGATAACATTAACACGCAATCACAGAACGAGAGCGGCGACGGTTCTTCGCCGAAAACTCCGAACCTACAGCTACCGAAGCAGCAGGCCCAGCAGCAAACCGAAGCTGGTCCTGGGCTTCTCAGGCCCACGAATTTGCTACCCGCGACAGCGATGTGGGCCGTGGCACCCGCTCCCGCAAGTGGGCCTCCCGGCAGCACAATTTGGATGCTTCCGGTAACCGCGGCTTCTTCTGCTTCTGCAGCAGCTGTAGCTGCCGCTTCAGCTTCTGCTTCTTCTGGTGGTGGTGGAACCTCTGCGAGTTCGGAGACTCCGATGTGGCCTTTTCCTCAGAGTGGTTTCATGCCAAGGTTCAATCTTCCAAGTGCCCTTGAATTCCAAGGCGCACGTGGGGGTTCTCTGCAACTGGGGTCAATGTTAATGCCGCAGCAACCTTCTCAACATCTGGGTCTCGCCATGTCCGATTCCAACTTCGGCATGTTGGCTGCGCTTAATGCTTACACCAGACCTGGTTTCAATATTAATTCTGACAATCATCATCACCATCATCACCATCATCATCCCTTGGACCATCAACATCAACATCAACCTCAACCTAGTGAGAGTGGAGAAGATGATCCTAATAGCTCCCAGTGA 1533 0.5629 MELSDLQNNKQNTTTNTDNNNNTNNTNTKTNTVRGGGVGVGGGGGGGGSAATHPRPQPNHHHQQSSSSHLQLPFDARTNPSSTFLSSSTSSSSSNSSSSSSSASASSHIIDASLAIATRSDDSANKTQQLSTAAAAANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSFRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHAHAHQQHQLLSADQIAEALPSGGGDSGDGYLRKRYREDLFKDDNINTQSQNESGDGSSPKTPNLQLPKQQAQQQTEAGPGLLRPTNLLPATAMWAVAPAPASGPPGSTIWMLPVTAASSASAAAVAAASASASSGGGGTSASSETPMWPFPQSGFMPRFNLPSALEFQGARGGSLQLGSMLMPQQPSQHLGLAMSDSNFGMLAALNAYTRPGFNINSDNHHHHHHHHHPLDHQHQHQPQPSESGEDDPNSSQ* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03152 510 MobiDBLite consensus disorder prediction 120 155 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 56 105 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 141 155 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 299 342 - -
Phac6g03152 510 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 83 496 IPR005333 GO:0003700
Phac6g03152 510 MobiDBLite consensus disorder prediction 1 34 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 471 510 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 302 338 - -
Phac6g03152 510 MobiDBLite consensus disorder prediction 1 105 - -
Phac6g03152 510 ProSiteProfiles TCP domain profile. 144 198 IPR017887 -
Phac6g03152 510 MobiDBLite consensus disorder prediction 120 138 - -
Phac6g03152 510 Pfam TCP family transcription factor 143 261 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03152 Phac-Chr6 26814657 26819569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03152 95 510 TCP Transcription Factor Family AT1G58100 38.636 3.11e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac6g03152 TCP 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03152 - - vra:106776202 657.907