Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03149 ATGTCAAGTGTCAATACTAGTGCTTACACCATCCACCTCCAAGCCTCTCATGAGGAACTAGAGATTTGGTACGAGGAGTGTTGCCGCAACCATGCAGTGGCCGTAGGAGGAGCTTCCTATGATGGGTGCAACGAGTATCAGAAAGCAAGCTCGCAGAAATCTTTCCTCTGTGCATGTTGTGGTTGTCACCGCAACTTTCACCGCAAACGCGTTACTTTGAAAAGAGAGCACCGAACTGTAGCAAGGGATGATCATGCTCTGGATATAGTTCCTGTTTTGGAGACGTTTCATCCGGAGCCAACCAACAACCCAGAGCCACTACAGCTGGTGAGGCCACTGAGGAGGAGGAGGACCACCTTCTCGCGCGACCAGAAGAAGCAGATGACAAGGTTTGCTGAGATTTTGGGGTGGAAACCTCACAAGGGTAACAGAGAGGATATTCAACGTTTCTGCACTGACATGGGAATAAGCCGCAAGATCTTTGTGGTGTGGCTCAACAACAATCGTCACCGTGCAACTCGAAATGTCAGCGAGAGAAATGATCCATCAAGCACTTAG 558 0.4946 MSSVNTSAYTIHLQASHEELEIWYEECCRNHAVAVGGASYDGCNEYQKASSQKSFLCACCGCHRNFHRKRVTLKREHRTVARDDHALDIVPVLETFHPEPTNNPEPLQLVRPLRRRRTTFSRDQKKQMTRFAEILGWKPHKGNREDIQRFCTDMGISRKIFVVWLNNNRHRATRNVSERNDPSST* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03149 185 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 24 70 IPR006456 -
Phac6g03149 185 Gene3D - 109 174 - -
Phac6g03149 185 SUPERFAMILY Homeodomain-like 108 174 IPR009057 -
Phac6g03149 185 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 17 171 - -
Phac6g03149 185 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 70 IPR006456 -
Phac6g03149 185 ProSiteProfiles 'Homeobox' domain profile. 111 175 IPR001356 GO:0003677
Phac6g03149 185 Pfam ZF-HD protein dimerisation region 22 71 IPR006456 -
Phac6g03149 185 NCBIfam homeobox domain, ZF-HD class 114 169 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03149 Phac-Chr6 26784229 26785236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03149 15 170 ZF-HD Transcription Factor Family AT5G60480 31.638 2.94e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac6g03149 ZF-HD_dimer 8.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03149 - - vra:106775003 225.713