Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03146 ATGGCTGTACATACAAAATTCCGTCTTATTACTTACTCACAAGAGATTGTAGATGGACAACCTATTTTTGTCTCTTCAAACTGTCTTCCTACGAAGGCTTTGAAATATGAACCTGCAGGTCATTCTTTCCATTCTGCTGCACTTAAACTTCGTGGTGTTCAGGAAGATAAGAATGAGGCTGATGACAAAAAGGTGGTTGATGATAAGGAACAAACGTACCTTCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGTACTGGGGACAAGCAACAAGATCACTATGCATTATTGGGTCTGGGTCATCTAAGGTATCTGGCTACTGAGGATCAAATTCGTAAAAGCTATCGGGAGACTGCCTTGAGGTTTCATCCTGACAAGCAGGCTGCCCTTCTTTTGGCTGAGGAAACAGAAGCTGCGAAACAAGCAAAGAAGGATGAAATAGAAAGTCACTTCAAGGCAATCCAGGAAGCATATGAAGTGCTGACTGATTCTGTGAAGAGAAGGATTTATGATTCCACAGATGAGTTTGATGACGAGATTCCCACTGATTGTGCTCCACAAGATTTCTTTAAGGTGTTTGGTCCTGCTTTTATGAGGAACGGACGATGGTCGGTTAATCAACCTATTCCTACACTAGGTGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCACATGCTGATGAGTTTGATCTCGAGCAAGCTGAATCTCGAGACCACAAGAGGTGGATGGAGAGGCAGAATGCAAAATTGACAGAAAAAGCTAGGAAGGAGGACTATGCACGGATTCGTACTCTTGTTGATAATGCTTACAAGAGGGACCCCAGAATATCGAGAAGAAAGGAAGAAGAAAAAGCCGAGAAACAAAGGAAAAAGGAGGCTAAGTTCCTGGCAAAGAAATTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAGGAGGAGAAGCAGAGAAAAGAGGAGGAAGAGAGACAAGCTGCAGAAGCTGCCTTACAACAGAAGAAGGTCAAAGAGAAAGAGAAAAAGCTGTTGCGAAAGGAGCGAGCTCGCCTTCGGACTCTTTCAGGACCTATTCTGTCCCAACGTTTGCTTGATATTTCTGATGATGATGTGGAAAGGCTTTGCATGTCACTTGATATTGAGCAGATGAGGAGTCTATGTGAGAGCATGGAAGGCAGGCAGGTTTTATTAGAGCAAGCAAGTGTTTTGAGAGATGCTCTGAGCTCTAAGAAAGATGAGAAAACCATCAAGGCTGATGAGAAAACCAATCAACAAAATGCCAATGGTTCCATCAAGGCTAATGGCAGTGCTTCGAGAAGCAATGTTGAGAAGAAGGAGGAGAAACCTTGGAGTAAAGAAGAGATTGATCTACTGAGGAAAGGAATGCAGAAATACCCCAAAGGAACTTCAAGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCTGTTGAAGAAATAATGAAGGCAACTAAAACTGTACTCCTCCAGAAACCTGATTCATCAAAAGCTTTTGACACTTTTCTTGAGAAAAGGAAACCTGGTGCACAATCAATTGAGTCTCCACTGACAACCAGAGAAGAATTAGAAGGGGTATCAACTCCTGCCTCAACCAATAACACAGAAGACCCTCATAGCAAAAACACAGATAATCAGAACTCTGCATCTGCTAATGGAGTTTCTTCCAGTTCAGAACAGGATGTGTGGTCTGCAGTGCAGGAACGAGCACTGGTTCAAGCTCTAAAAGCCTTTCCAAAGGAAACAAGCCAGAGGTGGGAGAGAGTTGCAGCAGCTGTACCTGGGAAGACTGTGAATCAGTGTAAGAAAAAATTTGCAATGATGAAGGAGAATTTCAGGAACAAGAAAAGTGCAGTCTAA 1929 0.423 MAVHTKFRLITYSQEIVDGQPIFVSSNCLPTKALKYEPAGHSFHSAALKLRGVQEDKNEADDKKVVDDKEQTYLPSDSYSSKSKKKSGTGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLTDSVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPTLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRISRRKEEEKAEKQRKKEAKFLAKKLQEEEAARIAEEEKQRKEEEERQAAEAALQQKKVKEKEKKLLRKERARLRTLSGPILSQRLLDISDDDVERLCMSLDIEQMRSLCESMEGRQVLLEQASVLRDALSSKKDEKTIKADEKTNQQNANGSIKANGSASRSNVEKKEEKPWSKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAQSIESPLTTREELEGVSTPASTNNTEDPHSKNTDNQNSASANGVSSSSEQDVWSAVQERALVQALKAFPKETSQRWERVAAAVPGKTVNQCKKKFAMMKENFRNKKSAV* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03146 642 SMART sant 461 514 IPR001005 -
Phac6g03146 642 SMART sant 582 634 IPR001005 -
Phac6g03146 642 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Phac6g03146 642 ProSiteProfiles SANT domain profile. 581 636 IPR017884 -
Phac6g03146 642 Gene3D - 457 515 - -
Phac6g03146 642 MobiDBLite consensus disorder prediction 436 453 - -
Phac6g03146 642 Coils Coil 301 369 - -
Phac6g03146 642 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Phac6g03146 642 SUPERFAMILY Homeodomain-like 584 639 IPR009057 -
Phac6g03146 642 CDD SANT 464 506 IPR001005 -
Phac6g03146 642 Gene3D - 576 642 - -
Phac6g03146 642 MobiDBLite consensus disorder prediction 54 92 - -
Phac6g03146 642 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 641 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Phac6g03146 642 CDD DnaJ 95 166 IPR001623 -
Phac6g03146 642 Gene3D DnaJ domain 78 187 IPR036869 -
Phac6g03146 642 PRINTS DnaJ domain signature 48 66 IPR001623 -
Phac6g03146 642 PRINTS DnaJ domain signature 118 133 IPR001623 -
Phac6g03146 642 PRINTS DnaJ domain signature 149 169 IPR001623 -
Phac6g03146 642 MobiDBLite consensus disorder prediction 329 352 - -
Phac6g03146 642 SMART dnaj_3 94 169 IPR001623 -
Phac6g03146 642 Pfam DnaJ domain 95 174 IPR001623 -
Phac6g03146 642 FunFam Myb family transcription factor 580 640 - -
Phac6g03146 642 MobiDBLite consensus disorder prediction 54 71 - -
Phac6g03146 642 Pfam Myb-like DNA-binding domain 585 630 IPR001005 -
Phac6g03146 642 Pfam Myb-like DNA-binding domain 463 504 IPR001005 -
Phac6g03146 642 ProSiteProfiles Myb-like domain profile. 578 632 IPR001005 -
Phac6g03146 642 CDD SANT 586 632 IPR001005 -
Phac6g03146 642 ProSiteProfiles Myb-like domain profile. 457 512 IPR001005 -
Phac6g03146 642 MobiDBLite consensus disorder prediction 535 583 - -
Phac6g03146 642 MobiDBLite consensus disorder prediction 423 466 - -
Phac6g03146 642 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Phac6g03146 642 MobiDBLite consensus disorder prediction 525 583 - -
Phac6g03146 642 SUPERFAMILY Homeodomain-like 463 507 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03146 Phac-Chr6 26768926 26773049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03146 96 294 C2H2 Transcription Factor Family AT1G74250 28.151 3.11e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac6g03146 DnaJ 4.6e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03146 K09522 - gmx:100806665 1010.36