Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03116 ATGAAGATTGTTGTGATGATGATGTTGCTACCCTTGATGTTTGCAGTGTTGTGTTCCATGAGTTTGAGTTGGGCTGCACCCTCTCCTTCCACAACACCCACATGCCCCATGGACTTGAATTATGTGCTGAGAATCCCATGGAACACTTCTGCTTGCCACAACTTCCAACAACCTTTGGCAGCAACAAATGGAACGGATGCAAACACTTGTTGTATATCACTGTTGTCCCTCTTTGGCGTGGGACTTGCACAGCATCTCAAAGAGACTTCTCAGTTCCAACTCCCCAACCATGCCACCTCAGTTTCATGCATCCTAGACTTCCAATCCAAGCTCTCTACCCTTTCTCTCCCCAACAACCTTGCCGACTCTTGCTTTGACCCTCTTCAGTTTGTGATCTCCCCCAACATCTGTGCTGGGATTCAAACCATCTCTGATTGGACCAAGAAGCTTGGTCAGTCCACACCACTCAACAGTGCCTGCAAACCGGATCTCACTGATCTCTCTCGCTGTGATTTGTGTCTGGGAGCAGGGTTACAGGTGAAGCAGGAGCTTATTTCCATAGATGGTAATGCTTCACATTCCTTAGATTGTTTTTACTTTGCCATTCTCTATGCTGCTGGGATTGTGAATGAGTTTGGACCTGAAAGCAATGGTGCTGTGACTTGTATTTTTAGCATGTCGGTTTATTCACAACGGGGTTCTGGGGCAAAGAGTCACCAGGCTCTTGTGTTTGGGTTGACAGGAGCTGGGGTGGCTTTGCTGGTGATGTCTTCTCTGTTGGGGGTTTATGTATGGTACGACAGGAAGCACAGGAGGAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCCTGAGGAACAAGGGTCTAGGCGTAGATTGAGGCCCAATACGGGGTCTATTTGGTTCAAAATTGGGGAGCTTGAGAAGGCAACTGATAGTTTTTCATCTAAGAACTTCATTGGCCGAGGTGGGTTTGGGTTGGTTTTCAAGGGAACCTTGGCTGATGGAAGTGTTGTAGCGGTTAAAAGGATCTTGGAATCTGATTATCAAGGAGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCATAGAAATCTGGTGCCTTTAAGAGGCTGTTGTGTGGCTGAGGAGAGTGAGGATTATGATGAAAGGGGAAGCCAAAGGTATCTTGTGTATGATTACATGCCAAATGGGAACCTGGAGGACCATCTCTTTGTATCATCAGACTCTCAGAAAGCAAAGGGGTCATTGACATGGCCTCAGAGGAAAAGCATAATCTTGGATGTGGCAAAGGGGTTGGCCTATTTGCACTATGGAGTTAAACCTGCAATTTTCCACAGGGATATCAAGGCCACCAATATACTACTTGATGAGGATATGAGGGCAAGAGTTGCTGATTTTGGTCTTGCCAAACAAAGTAGGGAGGGTCAATCTCATCTCACTACCAGAGTGGCTGGAACTCATGGATATCTAGCCCCGGAATATGCACTCTATGGTCAGCTCACTGAGAAAAGTGATGTGTATAGTTTTGGTGTGGTTGTTCTTGAGATTATGTGTGGGAGGAAGGCTCTTGACTTGTCTTCATCAGGATCACCAAGGGCATTCTTGATCACAGATTGGGCTTGGTCACTAGTGAAGGCTGGGAAGTTAGAAGAGGCTCTAGACGGTTCCCTGGTGAAGGATGAGAACTTTCCTAGCTCAAATCCTAAGAGCATAATGGAGAGGTTTTTGCTGGTGGGGATTCTATGCTCCCATGTGATGGTTGCTCTGAGGCCAACAATTACTGATGCTTTGAAGATGTTGGAAGGTGATGTTGAGGTTCCACAGATCCCAGATCGCCCTATGCCTCTAGGGCACCCTTCCTTTTACAATGATGGCAGTACTTTTAGCATTTCTCCAGCATTAAGTGGCCCCAAATTGCAAACTGGAGACATGCTCAGGTAA 1956 0.4622 MKIVVMMMLLPLMFAVLCSMSLSWAAPSPSTTPTCPMDLNYVLRIPWNTSACHNFQQPLAATNGTDANTCCISLLSLFGVGLAQHLKETSQFQLPNHATSVSCILDFQSKLSTLSLPNNLADSCFDPLQFVISPNICAGIQTISDWTKKLGQSTPLNSACKPDLTDLSRCDLCLGAGLQVKQELISIDGNASHSLDCFYFAILYAAGIVNEFGPESNGAVTCIFSMSVYSQRGSGAKSHQALVFGLTGAGVALLVMSSLLGVYVWYDRKHRRKKLETFQFDFDPEEQGSRRRLRPNTGSIWFKIGELEKATDSFSSKNFIGRGGFGLVFKGTLADGSVVAVKRILESDYQGDVEFCNEVEIISNLKHRNLVPLRGCCVAEESEDYDERGSQRYLVYDYMPNGNLEDHLFVSSDSQKAKGSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKAGKLEEALDGSLVKDENFPSSNPKSIMERFLLVGILCSHVMVALRPTITDALKMLEGDVEVPQIPDRPMPLGHPSFYNDGSTFSISPALSGPKLQTGDMLR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03116 651 PANTHER OS01G0750732 PROTEIN 57 613 - -
Phac6g03116 651 ProSiteProfiles Protein kinase domain profile. 314 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03116 651 CDD STKc_IRAK 320 607 - -
Phac6g03116 651 SMART serkin_6 314 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03116 651 SUPERFAMILY Protein kinase-like (PK-like) 295 606 IPR011009 -
Phac6g03116 651 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Phac6g03116 651 Gene3D Transferase(Phosphotransferase) domain 1 399 613 - -
Phac6g03116 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Phac6g03116 651 FunFam probable receptor-like protein kinase At1g11050 275 398 - -
Phac6g03116 651 Pfam SPARK 31 198 IPR043891 -
Phac6g03116 651 Pfam Protein kinase domain 316 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03116 651 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Phac6g03116 651 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 399 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03116 Phac-Chr6 26630283 26632238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03116 26 651 Receptor kinase-like Gene Family AT1G11050 64.753 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac6g03116 Pkinase 7.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03116 - - gmx:100806560 1175.23