Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03076 ATGTCTCTAACAGGTCGTTCTCGTGTTGTTGTGAATGGAGTTAGAAGAACCAGAACTTTTCACTACTTCTGGTGCCTATACTGCCAAAGAACCGTGAGATTACCCTTTACAAACAGTGATGGTTCTACATGCCCCTATTGCTTCCACCATCTGCGTTATGAGCTTGATATCTCAAGGCCAAGGCTTCTCATGAACCTGCCAAATAACCTGCAACCTTCACCAGCTTCTCAACTTTTGGATAGCTTGGCCCTTGTTCTTGATCCACCTCTAAGGAGGCACAACAACAACCATTTCAACACAACCACACAATGGGAAACAGAGAATGAACATGGTTCAGATCATCATGCTTGGATTACACTCCGCTTTCCAAGGCCAACTCGTGCAGATAGGCCTATTTCTCCAGAAAACTTGGTTCCTCATACCACTGACATTGACACCCTTTTTGAGAATACATTAGATGATGACTTCATTGATGGGGTGATTCAGAACAATAATAGAACAGGGCCACCTCCAGCAGCATCTTCTGCCATTTCTGCATTGCCAGTGGTGAAACTGACACAAGCCCATTTGGCAAGTGACCCCAATTGCCCTGTTTGCAAAGATGAGTTTGAGCTTGAGATGGAAGCCAGAGAGTTGCCATGCAAGCACTTCTACCATTCTGACTGCATCATCCCTTGGCTGCGCATGCACAACACTTGCCCTGTGTGCCGCTACGAGCTACAAGGTGTGGCTACTCCTAATGCTAATTACAGTTTCCAAAGAGATGAGAATGAGCTGAGTTTTGCGTTTGAGGAGATCTCAAACAGCTTGAGCTGGATTTGGAACCACTTGTTTTCATTCTCGCCTCTCCGTTCAGTCCTAGATTGGACACGCTCCTACTTTGATTTCCATGAAAATCGTCTTCGTGGTCGTGAAGGTAGGTCTTGGTGGCGATCATTGTTCATTATAGAGTGA 954 0.456 MSLTGRSRVVVNGVRRTRTFHYFWCLYCQRTVRLPFTNSDGSTCPYCFHHLRYELDISRPRLLMNLPNNLQPSPASQLLDSLALVLDPPLRRHNNNHFNTTTQWETENEHGSDHHAWITLRFPRPTRADRPISPENLVPHTTDIDTLFENTLDDDFIDGVIQNNNRTGPPPAASSAISALPVVKLTQAHLASDPNCPVCKDEFELEMEARELPCKHFYHSDCIIPWLRMHNTCPVCRYELQGVATPNANYSFQRDENELSFAFEEISNSLSWIWNHLFSFSPLRSVLDWTRSYFDFHENRLRGREGRSWWRSLFIIE* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03076 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 243 IPR013083 -
Phac6g03076 317 FunFam E3 ubiquitin-protein ligase RING1-like 160 243 - -
Phac6g03076 317 SMART ring_2 196 236 IPR001841 -
Phac6g03076 317 CDD RING-H2_RNF126-like 195 237 - -
Phac6g03076 317 Pfam Ring finger domain 195 237 IPR001841 -
Phac6g03076 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 129 240 - -
Phac6g03076 317 ProSiteProfiles Zinc finger RING-type profile. 196 237 IPR001841 -
Phac6g03076 317 SUPERFAMILY RING/U-box 176 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03076 Phac-Chr6 26502511 26505530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03076 1 296 C3H Transcription Factor Family AT1G68180 32.667 2.19e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03076 K11982 - gmx:100793656 438.728