Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03056 ATGGCAAGTTTCATTGGAAGAATTGAAGAGGCGATTAAGAGTAGTAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGGTTCGGCAGTGGACAGTGGCTTAAGGAGTAGGACTGCGTCAAATTTGGAAACAGAGGACAGTGTTCATAGTTTTGGTTGGGCGGTGGATAATGCAATGAAGAGTACGGTTGCGCCAAATCCCCCTCCTCTCCACGGTTTCGCTTCGGCAGTGGATAATGCCATTTGCAGCACCGTTGGTGCCGAAGCTGAGGCCGAAGCTGAAGCCGAAGCTGAAACGGAAGAGTCGGCGAACAGAGAGAGGTATATGGGGCTATGGCAGAAGGGTGACATGTTAGGGAAGGGCTCCTTCGGAACCGTCTACGAAGCCTTCACAGATGATGGGAACTTTTTTGCTGCAAAGGAGGTGTCCTTGCTGGATGATAGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCGACAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATCGTTCAATATCTAGGCACAGGCAAGGATAATGATAAGTTGTATATCTTCCTCGAGCTTGTAACAAAAGGATCATTAGCAAATCTCTACAAAAAGTATCGTTTAATGGACTCCCAAGTTTCTGCATATACAAGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGACCGTAATGTGATTCACAGGTAA 717 0.4589 MASFIGRIEEAIKSSSDSILGKGEYRVRGFGSAVDSGLRSRTASNLETEDSVHSFGWAVDNAMKSTVAPNPPPLHGFASAVDNAICSTVGAEAEAEAEAEAETEESANRERYMGLWQKGDMLGKGSFGTVYEAFTDDGNFFAAKEVSLLDDRSQGKQSIFQLRQEISLLSQFRHDNIVQYLGTGKDNDKLYIFLELVTKGSLANLYKKYRLMDSQVSAYTRQILSGLKYLHDRNVIHR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03056 238 ProSiteProfiles Protein kinase domain profile. 116 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03056 238 Gene3D Transferase(Phosphotransferase) domain 1 116 238 - -
Phac6g03056 238 SMART serkin_6 116 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03056 238 SUPERFAMILY Protein kinase-like (PK-like) 109 238 IPR011009 -
Phac6g03056 238 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 89 238 - -
Phac6g03056 238 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Phac6g03056 238 Pfam Protein kinase domain 117 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03056 Phac-Chr6 26408849 26414073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03056 116 238 MAP Kinase Kinase Kinase AT4G08500 65.854 3.16e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac6g03056 Pkinase 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03056 - K13414 pvu:PHAVU_006G2125001 416.772