Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03054 ATGGCAAGTTTCATTGGAAGAATTGAAGAGGCGATTAAGAGTAGTAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGGTTCGGCAGTGGACAGTGGCTTAAGGAGTAGGACTGCGTCAAATTTGGAAACAGAGGACAGTGTTCATAGTTTTGGTTGGGCGGTGGATAATGCAATGAAGAGTACGGTTGCGCCAAATCCCCCTCCTCTCCACGGTTTCGCTTCGGCAGTGGATAATGCCATTTGCAGCACCGTTGGTGCCGAAGCTGAGGCCGAAGCTGAAGCCGAAGCTGAAACGGAAGAGTCGGCGAACAGAGAGAGGTATATGGGGCTATGGCAGAAGGGTGACATGTTAGGGAAGGGCTCCTTCGGAACCGTCTACGAAGCCTTCACAGATGATGGGAACTTTTTTGCTGCAAAGGAGGTGTCCTTGCTGGATGATAGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCGACAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATCGTTCAATATCTAGGCACAGGCAAGGATAATGATAAGTTGTATATCTTCCTCGAGCTTGTAACAAAAGGATCATTAGCAAATCTCTACAAAAAGTATCGTTTAATGGACTCCCAAGTTTCTGCATATACAAGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGACCGTAATGTGATTCACAGGTTACGAAGTTAA 726 0.4573 MASFIGRIEEAIKSSSDSILGKGEYRVRGFGSAVDSGLRSRTASNLETEDSVHSFGWAVDNAMKSTVAPNPPPLHGFASAVDNAICSTVGAEAEAEAEAEAETEESANRERYMGLWQKGDMLGKGSFGTVYEAFTDDGNFFAAKEVSLLDDRSQGKQSIFQLRQEISLLSQFRHDNIVQYLGTGKDNDKLYIFLELVTKGSLANLYKKYRLMDSQVSAYTRQILSGLKYLHDRNVIHRLRS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03054 241 SMART serkin_6 116 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03054 241 Gene3D Transferase(Phosphotransferase) domain 1 116 238 - -
Phac6g03054 241 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 89 238 - -
Phac6g03054 241 Pfam Protein kinase domain 117 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03054 241 SUPERFAMILY Protein kinase-like (PK-like) 109 238 IPR011009 -
Phac6g03054 241 ProSiteProfiles Protein kinase domain profile. 116 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03054 241 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03054 Phac-Chr6 26408849 26414073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03054 116 238 MAP Kinase Kinase Kinase AT4G08500 65.854 3.08e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac6g03054 Pkinase 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03054 - K13414 pvu:PHAVU_006G2125001 416.772