Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03041 ATGGAAGGTCGCCGGAACCCGTCGAAGCCGCGCCTTGAGCGGCGGAACGCCATGAAGAACATCGATTACCGGTTGAAGGAGGAAGAAGACACCGACACCGACACGGACATAGACATAGATACTTTGGATGAAAGGAGTTTCCGAGTGGAAGGAATCGACGGCGAATTTGACCGTATCTTTCGGAGCTTGGGCCTGTCTGGGCCCGAGGACTTTGCCATCCCAGCCGCGGCCTGGAAAGAAGCCCAGGCCCACAAGGCCCGCAGCACCATGAACCTTCAACACGAACCGTCACAGAATAAAAAACAGAGTGAGGGGGGGATAAACGGCGTTAGGCCTCCCGTTTTGGAACCGACGCAGGTTAACTCTGCTTGGAGCTCCCAACAACCTACGGAGAGGGACCCACTTTCTGATTCCGTGTCACGTGATGATGACAGTGATGTTGGTGTTGAAGCTGAAATTGAAGAGGTTTCTGGTTCGGTCGGGAATGAGACCTTTGATGTTCATAATCTGTCGCCGAATGTGAACGGTTATTTCGGGTCGTGGCAAAAGGGCGAGATCTTGGGAAAGGGCTCTTTTGGAACTGTTTATGAAGGCTTCACCGATGATGGGAACTTTTTTGCTGTAAAGGAGGTGTCTTTACTGGATGACGATAGCCAGGGCAAACAGAGCATTTTCCAGCTTCAGCAGGAAATATCTCTTTTGAGTCAGTTCCGACACGACAACATAGTTCGATATCTTGGGACTGACAAGGATAATGATAAGCTGTATATCTTCCTTGAACTTGTAACAAAAGGATCATTAGCAAGTCTCTATCAAAAGTATCGATTAAGGGACTCTCAAGTTTCTGCATACACAAGACAGATTTTGAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGGTCCGTCAAGCTTGCAGATTTTGGATTGGCGAAGGCAACCAAGTTGAATGATGTTAAATCAAGTAAAGGCTCTCCTTACTGGATGGCCCCTGAGGTTGTTAACTTGAGGAACCGTGGATATGGGTTAGCAGCTGATATATGGAGCTTAGGATGTACAGTACTAGAGATGTTGACTCGGCAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCAATATTTCGAATTGGCAGTGGTCAACCTCCGCCGGTTGCAGAATCTTTGTCAGCAGATGCTCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGGCCAACTGCTGCGCGGCTATTGGACCATCCATTTGTAAAGAGAACACTTCTGTCTCCCATTAGTCCAATTTCTCCAAGTATTAATCTTTTACTGTCTTGA 1365 0.4696 MEGRRNPSKPRLERRNAMKNIDYRLKEEEDTDTDTDIDIDTLDERSFRVEGIDGEFDRIFRSLGLSGPEDFAIPAAAWKEAQAHKARSTMNLQHEPSQNKKQSEGGINGVRPPVLEPTQVNSAWSSQQPTERDPLSDSVSRDDDSDVGVEAEIEEVSGSVGNETFDVHNLSPNVNGYFGSWQKGEILGKGSFGTVYEGFTDDGNFFAVKEVSLLDDDSQGKQSIFQLQQEISLLSQFRHDNIVRYLGTDKDNDKLYIFLELVTKGSLASLYQKYRLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQAIFRIGSGQPPPVAESLSADARDFILKCLQVNPNKRPTAARLLDHPFVKRTLLSPISPISPSINLLLS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03041 454 SMART serkin_6 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03041 454 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Phac6g03041 454 Pfam Protein kinase domain 182 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03041 454 MobiDBLite consensus disorder prediction 118 134 - -
Phac6g03041 454 FunFam Mitogen-activated protein kinase 1, putative, expressed 179 447 - -
Phac6g03041 454 MobiDBLite consensus disorder prediction 84 147 - -
Phac6g03041 454 Gene3D Transferase(Phosphotransferase) domain 1 179 445 - -
Phac6g03041 454 ProSiteProfiles Protein kinase domain profile. 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g03041 454 MobiDBLite consensus disorder prediction 86 105 - -
Phac6g03041 454 MobiDBLite consensus disorder prediction 1 37 - -
Phac6g03041 454 SUPERFAMILY Protein kinase-like (PK-like) 178 445 IPR011009 -
Phac6g03041 454 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 438 - -
Phac6g03041 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Phac6g03041 454 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03041 Phac-Chr6 26340307 26344707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03041 11 91 MAP Kinase Kinase Kinase AT4G08500 37.778 1.03e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac6g03041 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03041 - K13414 var:108347588 775.393