Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03016 ATGAGAGATATAGGGAAAGTAGTACATGGGTTGAAACCAGCCCTTCTGATGTTGATGGTGCAGATTGCATTTGCTTCAGTCAACGTGCTCTACAAGCTTGTCATAAACGATGGAATGAGTGTGAGCGTAATTACTGCCTACCGTCTCATTTTTGCAGCAGCTTCTACAGTTCCTCTTGCTCTTATTTTTGAAAGGAAAAACATACCAACACTGACTTGGAGGGTGATTTTAAAGGCATTTTTCTGTGGCCTATTCGGGGGAAGTCTATTCCAAAACCTTTTCTTCGAGTCCTTGAAATTGATATCAGCAACATTTGGTTCTGCTGTTTATAATCTCATTCCTGCAGTCACTTTTATCTTGGCAGTAACTTGCGGTTTTGAAAAATTAAATTTCCAAAGAGCATCAGGTAAGGCTAAGGTGTTGGGAACAATAACAGGAGTTGGCGGGGCAATGATGCTGACATTTCTCAAAGGTGTAGAAATCAACATTTGGACCTTCCACATTAACCTTTTGCATAAAAAGGGTACCAGGGGAACACAGAATGGTGACTCTGCAAGTAAATTGTTAGGAGTCTTTTGTGGTTTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCATTGTTCAGGCTCAGATGAGTAAAGAGTTCCCAGGCCATCACTCAAGCACAGCTTTGATGTCACTAATGGGAGCAATTCAAGCCACTATTTATGCCCTGTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGCATTAGGCTTCTAACTGCAGCATATTCGGGAATTGTTTGCTCTGGAATAATGGTTGTTGTGATTGCATGGTGTGTAAGGATGAGAGGTCCAATGTATGCATCTGTTTTCAATCCTCTTTTGCTAGTGCTTGTGGCCATTGCTGGTTCCTTGGTGTTGGATGAGAAGCTGTACATAGGAAGTGTGATGGGAGCAGTGCTAATTGTGATGGGATTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAGAGTGAGTCACTTAGAAACTACTCCAGAACTAGAAGAAATTGAGGTTCATGATAAAAGTAGGTGCAGCAACGACAAGTACACCTGTAGTGAGAACAACAGTGTTGGGAAGGATGATGATAATGCATCAAAAAGCGAAGATGAAGGACAAGACAAGGAAAATAATGGAAAACAAGATATGGGTAGCTCCAATGGAAGTGTAGAAGGCCTAAAAGGTAGAAATTAG 1230 0.4179 MRDIGKVVHGLKPALLMLMVQIAFASVNVLYKLVINDGMSVSVITAYRLIFAAASTVPLALIFERKNIPTLTWRVILKAFFCGLFGGSLFQNLFFESLKLISATFGSAVYNLIPAVTFILAVTCGFEKLNFQRASGKAKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKKGTRGTQNGDSASKLLGVFCGFGSCFCFALWLIVQAQMSKEFPGHHSSTALMSLMGAIQATIYALCVEKDWSQWRLGWSIRLLTAAYSGIVCSGIMVVVIAWCVRMRGPMYASVFNPLLLVLVAIAGSLVLDEKLYIGSVMGAVLIVMGLYMVLWGKSKEMKRVSHLETTPELEEIEVHDKSRCSNDKYTCSENNSVGKDDDNASKSEDEGQDKENNGKQDMGSSNGSVEGLKGRN* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03016 409 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Phac6g03016 409 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Phac6g03016 409 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Phac6g03016 409 MobiDBLite consensus disorder prediction 372 390 - -
Phac6g03016 409 MobiDBLite consensus disorder prediction 391 409 - -
Phac6g03016 409 MobiDBLite consensus disorder prediction 358 409 - -
Phac6g03016 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Phac6g03016 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03016 Phac-Chr6 26234479 26237253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03016 11 360 Nodulin-like Gene Family AT1G25270 40.563 2.03e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03016 - - pvu:PHAVU_006G210200g 650.973