Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03013 ATGGAGAAGAGGAACGTGGTGCATGCATTGAAGCCAGTTCTGCTGCTGGTGATGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTAGCCCTTAACGATGGCATGAACTTGAGTGTCATTGTTGCTTACCGCTATGTTTTTGCAACTCTTTTCATTTCTCCACTTGCTTTTCTTATTGAAAGGAAGACGAGAACGAAGATGAGTTGGATGATACTGTTTCAGGCATTTGTATGCGGGTTAATTGGAGGAGCATTGCCTCAAAACTTAAACATGGAAGCAATCGCTTTAACTTCAGTAACGTTCACAACTGCCATATCCAATCTCGTTCCAGCTCTCACCTTTATCATATCCCTTTCCTTCGGACTGGAGAGATTAAATTTAAGAACAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATCAGTGGAGCAATGGTTCTAACATTCGTTAAAGGCCCAGAAATTGAGATGTTGTCGTTCCATATAAACCTTTTTAACCACCCAAACACCAACGTAGTACATCCACACGCTACTTCTGGCTTTATGACCATGTTCGGTGCTCTCGCGTCTGTCGGAAGCAACGTATCTTATGCACTCTGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCTTATTCAAGCACAGCCTTAATGTCCCTAATGGGGGCACTGCAATCCGTTTCTTATGCATTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGATTAGGTTGGAATATCAGACTATTCACAGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCACGAGAGGTCCATTGTTTGTCTCCATTTTTAGCCCTCTTATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAGCTATACCTTGGAAGCATAATTGGATCAGTGATGATTATTTGCGGATTATACATGGTTCTGTGGGGGAAAAGCAAAGAGATGAGGAAGAATGAATGGATTCCATCAGAAAGCACAGACAAATTTGACACAGTTGAAATAATGGTAAAACCTGGAGGAGTAGAAGATAAGAGCAACAATAGCCTGGTGAATGCAGTAAATGGTGTTGGGGATAATGAAGATTCATGGAAAAGTGGAGGTGAAAACAATCAGTGTTGCGAGGCCAAAGAAGTAATATCTCAGAAGACCTAA 1212 0.4257 MEKRNVVHALKPVLLLVMVQVANAWVNVLYKLALNDGMNLSVIVAYRYVFATLFISPLAFLIERKTRTKMSWMILFQAFVCGLIGGALPQNLNMEAIALTSVTFTTAISNLVPALTFIISLSFGLERLNLRTAGGKAKIIGTITGISGAMVLTFVKGPEIEMLSFHINLFNHPNTNVVHPHATSGFMTMFGALASVGSNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALQSVSYAFCVERDLSQWRLGWNIRLFTVAYAGIVVSGVMVAVISWCVRTRGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYMVLWGKSKEMRKNEWIPSESTDKFDTVEIMVKPGGVEDKSNNSLVNAVNGVGDNEDSWKSGGENNQCCEAKEVISQKT* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03013 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Phac6g03013 403 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0016020|GO:0022857
Phac6g03013 403 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020
Phac6g03013 403 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Phac6g03013 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03013 Phac-Chr6 26225054 26230390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03013 10 336 Nodulin-like Gene Family AT1G68170 46.483 1.90e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03013 - - gmx:100788378 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g03013 6 26225054 26230390 Phac6g03013 6 26225054 26230390 ECH