Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g03004 ATGGTCGGGAGTGCTCACAGTTTAAATGAGGATTTGAGCATCAACGGAGCAGTCGAACCGTTGCCTGAGGATTTTGACGCAACATCTTTAGTCATGGATCCTGTGCCTCCTGCAGTTGTAGACAACGGCAATGAAGAGGTGCAGGTCTATAAGGAAAAAGAGAAAAGACTAATAGTTCTGGGAAGAAATATTCATACCATGTCTCTAGAAGTCACAGAGCCTGATGCAGATGACGACATTACTGGGGACCGGGAAGCTCATATGGCAAGTGTGTTGGCCAGATACAAAAGAGCTTTGACTGAAAGGACAAAACATCATTTAGGGTACCCCTATAATTTGGATTTCGATTATGGTGCACTCTCACAACTTCAGCATTTTTCTATAAATAACCTGGGAGATCCATTTATTGAAAGCAACTATGGTGTCCACTCCCGTCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCTCGACTGTGGGAACTGGAGAAAAATGAGTATTGGGGCTATATAACAAACTGTGGTACAGAAGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTTTTCCCAAATGGGATTTTGTACGCCTCACGAGAGTCACATTATTCTGTTTTTAAAGCTGCTCGAATGTACAGAATGGAATGTGTGAAGATTGATACTCTTTGGTCTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGCTTCTTCGTAATCAGGACAAGCCAGCAATTGTAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTAGTTATAAAGAAACTTGAAGAAGCTGGATTTTCGCAGGACAGATTCTACATACACTGTGACGGGGCCTTGTTTGGTCTCATGATGCCTTTCGTGAAACGAGCTCCGAAAGTTACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTAGGTTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGATTATGTTAATGCTCTTTCTAGGGATGTGGAATACCTTGCTTCTAGGGATGCCACGATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAATCGGAAAGGATATAGAGGTTTCCAGAAAGAAGTACAGAAATGCTTGCGAAATGCACACTACTTCAAAGATCGCCTTGTTGAGGCTGGGATTGGTGCAATGCTTAATGAGCTGAGCAGCACAGTTGTGTTTGAGAGGCCACACGATGAGGAATTTATACGCAGGTGGCAGTTGGCATGCAAGGGGAATATTGCACATGTGGTGGTGATGCCTAACATCACTATTGAGAAGCTGGATGATTTTCTGAACGAGCTTCTGGAGAAGCGTGCTACCTGGTTTCAAGATGGGAAGGATCAACCTTACTGTATATCGTCAGACGTAGGTGAAAAGAATTGCCTTTGTGCTTTGCACAAGTAA 1452 0.436 MVGSAHSLNEDLSINGAVEPLPEDFDATSLVMDPVPPAVVDNGNEEVQVYKEKEKRLIVLGRNIHTMSLEVTEPDADDDITGDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPNGILYASRESHYSVFKAARMYRMECVKIDTLWSGEIDCDDFKAKLLRNQDKPAIVNVNIGTTVKGAVDDLDLVIKKLEEAGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLDYVNALSRDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLVEAGIGAMLNELSSTVVFERPHDEEFIRRWQLACKGNIAHVVVMPNITIEKLDDFLNELLEKRATWFQDGKDQPYCISSDVGEKNCLCALHK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g03004 483 Pfam Pyridoxal-dependent decarboxylase conserved domain 193 404 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phac6g03004 483 SUPERFAMILY PLP-dependent transferases 103 453 IPR015424 -
Phac6g03004 483 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 307 328 IPR021115 GO:0016831
Phac6g03004 483 PANTHER - 50 483 - -
Phac6g03004 483 Gene3D - 121 365 IPR015421 GO:0003824
Phac6g03004 483 Gene3D Aspartate Aminotransferase, domain 1 366 454 IPR015422 GO:0003824
Phac6g03004 483 FunFam Serine decarboxylase 1 122 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g03004 Phac-Chr6 26167511 26172181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g03004 206 389 Calmodulin-binding Proteins AT1G65960 26.943 6.43e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g03004 K25193 - gmx:100785163 929.858