Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02993 ATGGGAGACACCAATGTCAACATTCCACCAGGCTTTCGATTCTATCCCACAGATGAAGAGCTTGTAGTCCATTTCCTTCACAGAAAAGCCTCACTTTTGCCTTGCCACCCTGATGTCATCCCTGATCTTGAGGTCTACCAATATGATCCATGGGAACTTGATGGTAGAGCTTTGGCAGAGGGAAACCAATGGTACTACTACAGCAGAAGGACACCAAATAGGGTCACTGGCAATGGGTATTGGAAACCAACGGGAATGGAAGAGCCAGTGTTTTCAAGCTCAAACAGCAAGAGAGTTGGCATGAAGAAATATTTTGTGTTTCATGTAGGAGAAGCCGCTACTGGTATCAAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTGCTTCCTCTACCAGATCATCCAAAAGAAAACCTCAACCAAAAGCAGATTACAATAAATGGGTGATATGTCGTGTTTATGAGCGTAATGGAGAGGATGACAATGGAACAGAGCTCTCATGTTTGGATGAAGTATTCTTGTCATTGGATGATGATCTTGATGAAATAAGCTTACCAAATTAG 570 0.4211 MGDTNVNIPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLEVYQYDPWELDGRALAEGNQWYYYSRRTPNRVTGNGYWKPTGMEEPVFSSSNSKRVGMKKYFVFHVGEAATGIKTNWIMQEYRLSDSASSTRSSKRKPQPKADYNKWVICRVYERNGEDDNGTELSCLDEVFLSLDDDLDEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02993 189 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Phac6g02993 189 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Phac6g02993 189 PANTHER NAC TRANSCRIPTION FACTOR 56 8 164 - -
Phac6g02993 189 FunFam NAC domain-containing protein 104 17 161 - -
Phac6g02993 189 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phac6g02993 189 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02993 Phac-Chr6 26131985 26133111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02993 1 176 NAC Transcription Factor Family AT1G61110 41.026 1.88e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac6g02993 NAM 1.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02993 - - gmx:100793989 364.385