Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02986 ATGTCTTTGACAAATGTTTCTTCTTTGCAAGTTCTTGATCTCTCGAACAACCATCTCCAGGGGGAAACCCCAGTGAATGGTTCGTTTTCATTATTTACCCCTATCAGTTATCAAAATAATCCTGGCTTGATACCTCCAAAAAACGCTCCATCTCCCGTATCTCCAACACCGCCACCAGCTTCTTCAGGAAATAGTAACACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGCTTATTGGCGAAAGAGGAAACCTCAGGATCATTTCTTTGATGTTCCTGCCGAGGAGGATCCTGAAGTTCACCTTGGTCAACTTAAAAGGTTTTCGCTACGTGAGCTGCAAGTTGCCACAGATAACTTTAGTAACAAACACATTCTGGGTAGGGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGACGGATCTCTCGTAGCAGTGAAAAGACTTAAAGAGGAACGTACGCAGGGTGGGGAGCTCCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGTAATTTGCTTCGGCTTCGTGGTTTTTGTATGACTCCTACTGAACGATTGCTTGTGTATCCTTACATGGCTAATGGAAGTGTAGCTTCATGTTTACGAGAGCGTCAAGAATCTCAACCACCACTTGGCTGGCCAGAACGGAAGCGTATTGCTTTGGGATCTGCAAGGGGACTTGCTTATTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCAGCAAATATTTTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTTGGTTTGGCAAAACTTATGGATTATAAAGATACTCACGTTACTACTGCTGTACGTGGAACAATTGGACATATAGCTCCTGAGTACCTTTCTACTGGAAAATCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTCATAACTGGACAAAGGGCTTTTGATCTAGCTCGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTTAAAGGACTTCTCAAAGACAGGAAATTGGAAACACTGGTAGATGCAGATTTAGTGGGCAATTACATTGACGAGGAGGTAGAGCAGTTAATCCAAGTGGCCTTACTATGCACACAAGGCTCTCCTATGGAAAGACCAAAGATGTCTGAGGTTGTCAGAATGCTAGAAGGTGATGGTTTGGCCGAGAAATGGGAGCAATGGCAGAAAGACGAGACGTTCCGGCAAGACTTCAACAACAACATTCATCACCCCAATGCTAATTGGATAGTAGATTCAACTTCCCACATCCAAGCAGATGAACTGTCAGGTCCTAGATGA 1371 0.4369 MSLTNVSSLQVLDLSNNHLQGETPVNGSFSLFTPISYQNNPGLIPPKNAPSPVSPTPPPASSGNSNTGAIAGGVAAGAALLFAAPAIALAYWRKRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERQESQPPLGWPERKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDRKLETLVDADLVGNYIDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKDETFRQDFNNNIHHPNANWIVDSTSHIQADELSGPR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02986 456 Gene3D Ribonuclease Inhibitor 1 54 IPR032675 -
Phac6g02986 456 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02986 456 FunFam Somatic embryogenesis receptor kinase 1 101 208 - -
Phac6g02986 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Phac6g02986 456 MobiDBLite consensus disorder prediction 41 65 - -
Phac6g02986 456 Gene3D Transferase(Phosphotransferase) domain 1 209 426 - -
Phac6g02986 456 FunFam Somatic embryogenesis receptor-like kinase 1 209 426 - -
Phac6g02986 456 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 417 - -
Phac6g02986 456 SMART serkin_6 132 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02986 456 SUPERFAMILY Protein kinase-like (PK-like) 111 407 IPR011009 -
Phac6g02986 456 MobiDBLite consensus disorder prediction 45 59 - -
Phac6g02986 456 Gene3D Phosphorylase Kinase; domain 1 101 208 - -
Phac6g02986 456 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Phac6g02986 456 Pfam Protein kinase domain 133 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02986 Phac-Chr6 26090638 26097423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02986 2 456 Receptor kinase-like Gene Family AT4G33430 85.996 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac6g02986 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02986 K13416 - gmx:100800522 857.825