Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02982 ATGGAAGTTCTCACGATAGCTTCAACTCTCAGCATTTCCAAATCATCCCAAACGTTTCCACTCCCAAAGAAACACCAAACACCACATCCTCCTCCCACGCGCTTCTCAGTCTCTTGCAGAGCCACGAAACAGCTTCGAGGTGTGGAAGACAACTTGTACAAGATTCTAAGCCTGAGTCCCAACACTGCCACCTCCGACGACATAAAGAAAGCCTACAGATCAATGGCTCTTCAGTGCCACCCCGATGTGTGCCACGACGGTTCGAGGAAAGAGGAGTTGACGAGGATGTTTGTGCAACTCAACGAAGCTTACACCACCTTGTCGAATCCAAGGCTTCGAGCAGAGTATGACTATGAATTGGGTTTGAGAAGCAGCAGAATGAGCGTTGGTAACGACAGTTGGAGAATGAGATGGGAGGACCAACTCACGGAGTTGAAGAGAAGATCTCACAACCGTATGCAACATAATCATGGATCGTGGGGCACAAGAGTCAGAGCACAGACCATGAACTCAAATTATTTGTTGAAGAACACCCACATAGTGGAAAGCAGAGTCCCCAACCCTGCAATTAGATTCAGAGCAATGGATGTTCTCAGATTCACCTCAAACCTTGGCACCACTCACATGCTTCCACTCTCAAAAAAACACCAAACACAACCTCCTCGTACCAAGTTCTCTGTTTCATGCAGAGCCACAAAACTTAAGCCATGTGTGGAAGAGAACTTGTACAAGGTTCTGAGTTTGAGTCCCATGAGTGCAACCACAGATGACATAAAGAAGGCGTATAGATCAATGGCTCTTCAGTACCACCCTGACGTGTGCCATGATGGTTCCAAGAAAGAAGAGTTGACGAGGATGTTTGTGCAACTAAACGCAGCCTACACCACCTTGTCGAACCCAGAGCTTCGAGCAGATTATGATTATGAGTTGGGTTTGAGAAGCAAGAAAAGTGTGGCAGATGAGAGGTGGAGAAGTAGGTGGCAGGAGCAGGTGGTTGAGTTGAAGAGAAAGTCTCACACACGCATGGCACAAAGGGAGGGTTCCTGGGGTTGTAGAGTCAGAGCACAAAACATGAATTGA 1080 0.4741 MEVLTIASTLSISKSSQTFPLPKKHQTPHPPPTRFSVSCRATKQLRGVEDNLYKILSLSPNTATSDDIKKAYRSMALQCHPDVCHDGSRKEELTRMFVQLNEAYTTLSNPRLRAEYDYELGLRSSRMSVGNDSWRMRWEDQLTELKRRSHNRMQHNHGSWGTRVRAQTMNSNYLLKNTHIVESRVPNPAIRFRAMDVLRFTSNLGTTHMLPLSKKHQTQPPRTKFSVSCRATKLKPCVEENLYKVLSLSPMSATTDDIKKAYRSMALQYHPDVCHDGSKKEELTRMFVQLNAAYTTLSNPELRADYDYELGLRSKKSVADERWRSRWQEQVVELKRKSHTRMAQREGSWGCRVRAQNMN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02982 359 Gene3D DnaJ domain 38 143 IPR036869 -
Phac6g02982 359 Gene3D DnaJ domain 229 335 IPR036869 -
Phac6g02982 359 CDD DnaJ 51 109 IPR001623 -
Phac6g02982 359 Pfam DnaJ domain 51 117 IPR001623 -
Phac6g02982 359 Pfam DnaJ domain 241 307 IPR001623 -
Phac6g02982 359 ProSiteProfiles dnaJ domain profile. 241 310 IPR001623 -
Phac6g02982 359 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 37 171 - -
Phac6g02982 359 SMART dnaj_3 240 302 IPR001623 -
Phac6g02982 359 SMART dnaj_3 50 112 IPR001623 -
Phac6g02982 359 SUPERFAMILY Chaperone J-domain 36 116 IPR036869 -
Phac6g02982 359 CDD DnaJ 241 299 IPR001623 -
Phac6g02982 359 PRINTS DnaJ domain signature 262 277 IPR001623 -
Phac6g02982 359 PRINTS DnaJ domain signature 244 262 IPR001623 -
Phac6g02982 359 PRINTS DnaJ domain signature 282 302 IPR001623 -
Phac6g02982 359 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Phac6g02982 359 SUPERFAMILY Chaperone J-domain 237 306 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02982 Phac-Chr6 26048768 26058107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02982 243 307 C2H2 Transcription Factor Family AT1G74250 43.284 3.44e-06 47.0