Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02967 ATGGCTTCGTCTCTTTCATTTCCAATTCCGTTCGCAATGGATTCGCCGTCGTGTGTGACGGTGACGCATATGGCACTGTCCAAACCTCTGAAACACCATCGTCCTTTGGTCAGAGGCAAAGTCAGAGTTGGACCGCTTCATCGCCGCCTCAACTCCGTTGCGCCGTTCCGGTGCTCTTCCGCCGCGGACGACGCTGTCATCACTCTCCACGTTGGGGGAATGATGTGCGAAGGATGCGCTAATAGCGTCAAAAAGCTTTTAGAAAGCCGACCTCAAGTGTTATCTGCTCGTGTAAATTTGACATCCGAGTTAGCAATTGTTTCGCCTGCACCTGAAGAAAAACCGGCACCAAATTATCTAAAGCAATTAGGGGAGGAACTTGCACAACATTTAACTACCTGTGGTTTCACTTCTACCCTTCAAGGAAAATTGGCTTGTCTTTCGCTAAAACCGGACAAGATTGTTCCATGCTTTGAATATACACTTGAAGGGTCCTCTAAGGTTCCAACTTTGTTGCAATACTCAAGGTGTAAGGAAGACATGCACCAAAGGTTCCCATCACTGATAGTTGTAGCGAGCAATATTTTGATGTTCTCTATGCCTGATATAGCTTTGGCTGAAACTTGTGAGGCTGGTAACTCTTTTTTCAATATGCCTATATTGCTAGCGGTAGCCCTCATTGGAGCCACTGTTGGAGGGTTGCTTGCTCGACAAAGAAGAAATGAATTACAACGAGTAAACGAGCAATTAATCCAAATCAATGCAGCGTTAAGGAAGCAAGCCAAAATTGAGTCTTATGCTCCTAGCTTGAGTTATGCTCCCATTGGTGGTGGTAGGATACCTGATAATGAAATTATTGTTGACCCAAAGAAGCAAGATCTAATTTCTAAGTTGAAAAATGGAAAGAACTTTCTAAGGAATCAACAGTTGGATAAAGCATTCATAGAGTTTAAGAATGCACTTGAGCTTGCCCAGAATCTACAGGATCCTATCGAAGAGAAAAAGGCCGCTAGAGGTCTAGGAGCCTCATTGCAAAGACAAGGAAAATATCGAGATGCTATTAAATACCATTCCATGGTTTTGGCCATCTCTGAACGAGAAAGGGAGGACTCGGGGAATACAGAGGCGTATGGGGCAATTGCTGATTGTTACACTGAGCTTGGAGAGCTTGAGAAAGCAGGTCAATTCTATGACAAGTATATTGCAAGATTGGAAAAGGACTAA 1224 0.4404 MASSLSFPIPFAMDSPSCVTVTHMALSKPLKHHRPLVRGKVRVGPLHRRLNSVAPFRCSSAADDAVITLHVGGMMCEGCANSVKKLLESRPQVLSARVNLTSELAIVSPAPEEKPAPNYLKQLGEELAQHLTTCGFTSTLQGKLACLSLKPDKIVPCFEYTLEGSSKVPTLLQYSRCKEDMHQRFPSLIVVASNILMFSMPDIALAETCEAGNSFFNMPILLAVALIGATVGGLLARQRRNELQRVNEQLIQINAALRKQAKIESYAPSLSYAPIGGGRIPDNEIIVDPKKQDLISKLKNGKNFLRNQQLDKAFIEFKNALELAQNLQDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLAISEREREDSGNTEAYGAIADCYTELGELEKAGQFYDKYIARLEKD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02967 407 Pfam Heavy-metal-associated domain 68 115 IPR006121 GO:0046872
Phac6g02967 407 Gene3D - 63 143 - -
Phac6g02967 407 Coils Coil 236 260 - -
Phac6g02967 407 Pfam Tetratricopeptide repeat 337 406 - -
Phac6g02967 407 SUPERFAMILY HMA, heavy metal-associated domain 64 114 IPR036163 GO:0046872
Phac6g02967 407 FunFam Copper-transporting ATPase PAA1, chloroplastic 65 140 - -
Phac6g02967 407 ProSiteProfiles Heavy-metal-associated domain profile. 65 132 IPR006121 GO:0046872
Phac6g02967 407 SUPERFAMILY TPR-like 301 402 IPR011990 GO:0005515
Phac6g02967 407 Gene3D Tetratricopeptide repeat domain 289 407 IPR011990 GO:0005515
Phac6g02967 407 ProSitePatterns Heavy-metal-associated domain. 71 100 IPR017969 GO:0046872
Phac6g02967 407 CDD HMA 68 139 IPR006121 GO:0046872
Phac6g02967 407 PANTHER PROTEIN FLUORESCENT IN BLUE LIGHT, CHLOROPLASTIC 173 407 IPR044243 GO:0015995|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02967 Phac-Chr6 25956039 25961022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02967 66 139 Primary Pumps ATPases AT4G33520 64.865 1.21e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02967 - - vra:106775694 735.717