Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02966 ATGGCTTCGTCTCTTTCATTTCCAATTCCGTTCGCAATGGATTCGCCGTCGTGTGTGACGGTGACGCATATGGCACTGTCCAAACCTCTGAAACACCATCGTCCTTTGGTCAGAGGCAAAGTCAGAGTTGGACCGCTTCATCGCCGCCTCAACTCCGTTGCGCCGTTCCGGTGCTCTTCCGCCGCGGACGACGCTGTCATCACTCTCCACGTTGGGGGAATGATGTGCGAAGGATGCGCTAATAGCGTCAAAAAGCTTTTAGAAAGCCGACCTCAAGTGTTATCTGCTCGTGTAAATTTGACATCCGAGTTAGCAATTGTTTCGCCTGCACCTGAAGAAAAACCGGCACCAAATTATCTAAAGCAATTAGGGGAGGAACTTGCACAACATTTAACTACCTGTGGTTTCACTTCTACCCTTCAAGGAAAATTGGCTTGTCTTTCGCTAAAACCGGACAAGATTGTTCCATGCTTTGAATATACACTTGAAGGGTCCTCTAAGGTTCCAACTTTGTTGCAATACTCAAGGTGTAAGGAAGACATGCACCAAAGGTTCCCATCACTGATAGTTGTAGCGAGCAATATTTTGATGTTCTCTATGCCTGATATAGCTTTGGCTGAAACTTGTGAGGCTGGTAACTCTTTTTTCAATATGCCTATATTGCTAGCGGTAGCCCTCATTGGAGCCACTGTTGGAGGGTTGCTTGCTCGACAAAGAAGAAATGAATTACAACGAGTAAACGAGCAATTAATCCAAATCAATGCAGCGTTAAGGAAGCAAGCCAAAATTGAGTCTTATGCTCCTAGCTTGAGTTATGCTCCCATTGGTGGTGGTAGGATACCTGATAATGAAATTATTGTTGACCCAAAGAAGCAAGATCTAATTTCTAAGTTGAAAAATGGAAAGAACTTTCTAAGGAATCAACAGTTGGATAAAGCATTCATAGAGTTTAAGAATGCACTTGAGCTTGCCCAGAATCTACAGGATCCTATCGAAGAGAAAAAGGCCGCTAGAGGTCTAGGTTTGTCATCTTTCCTATGTTGCTTATGA 1050 0.44 MASSLSFPIPFAMDSPSCVTVTHMALSKPLKHHRPLVRGKVRVGPLHRRLNSVAPFRCSSAADDAVITLHVGGMMCEGCANSVKKLLESRPQVLSARVNLTSELAIVSPAPEEKPAPNYLKQLGEELAQHLTTCGFTSTLQGKLACLSLKPDKIVPCFEYTLEGSSKVPTLLQYSRCKEDMHQRFPSLIVVASNILMFSMPDIALAETCEAGNSFFNMPILLAVALIGATVGGLLARQRRNELQRVNEQLIQINAALRKQAKIESYAPSLSYAPIGGGRIPDNEIIVDPKKQDLISKLKNGKNFLRNQQLDKAFIEFKNALELAQNLQDPIEEKKAARGLGLSSFLCCL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02966 349 Coils Coil 236 260 - -
Phac6g02966 349 Gene3D - 63 143 - -
Phac6g02966 349 Pfam Heavy-metal-associated domain 68 115 IPR006121 GO:0046872
Phac6g02966 349 ProSiteProfiles Heavy-metal-associated domain profile. 65 132 IPR006121 GO:0046872
Phac6g02966 349 FunFam Copper-transporting ATPase PAA1, chloroplastic 65 140 - -
Phac6g02966 349 ProSitePatterns Heavy-metal-associated domain. 71 100 IPR017969 GO:0046872
Phac6g02966 349 SUPERFAMILY HMA, heavy metal-associated domain 64 115 IPR036163 GO:0046872
Phac6g02966 349 Gene3D Tetratricopeptide repeat domain 289 345 IPR011990 GO:0005515
Phac6g02966 349 CDD HMA 68 139 IPR006121 GO:0046872
Phac6g02966 349 PANTHER PROTEIN FLUORESCENT IN BLUE LIGHT, CHLOROPLASTIC 173 343 IPR044243 GO:0015995|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02966 Phac-Chr6 25956039 25961022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02966 66 139 Primary Pumps ATPases AT4G33520 64.865 7.73e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02966 - - vra:106775694 604.364