Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02964 ATGAATTTATTCTGGTTTATTTCTCAGGGTAACAAAAATATTGTAGTGAATACCGAAGGTGATGAGGTCCCACAGGATTCCCAAAAGGTTACTTCACTTAGCACAGATTCTGTCAGCCCATCAAGCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGAGGATATCCACCAAATTAGTTCTGGGTTGCGCCCATTACATGAGTCACAACATATGGGGAATGGTCCACTGACAGAAAAGATTGATGGTGGTGTGAACAGTTCATATCATATGCATTCCTTTTCAGGTGATCATGGACAGTCATCAATTTCTGGAACAGATTATATCCCAGTTGTTCATGGGGATAAATTTAGAGGAAATGACACTACGTATTTTGATGGTGAGAAAACACATGGCGTGGCACCATGGGACACTGTCTTGGAAAGCACTGCCAATTTGCATAATGATCCTTCTCTTGCATCATTTCCTTCAATGCCCTCTAGTTCAATGGGTAGTGTCCTTGAACAAGAACATACCATTTTTGGTGACCTTTTAACAGGCAAAAGAGATCTCACCGAGGAAGCAGAGAGCTCTCACTCTTTCCAATCGAGTTGGCAGATTCCTTTTGAAGACAATTCGGGAAATATGCCAATGTCAACCCTAACCCCCCAATCATTTGGTCTGCAATTTGGATCTGATTATGGCACCAGTTCACTAGGGTATGAGACTCGTAATACAAGTTCTGAAATTGCTCCGATCCTGTACAGTTTTAATGGTGATCCAAAAGAGCAGCTCATGCAGAAAAACTATCCACAAGAGCATGCAGATGGACAATCTCAACATACTCTAAAATCCAATTCTGCAATTAAAGTTTCTGATGAAGAATCTGTCAACTATAGCTCAAATGTGAAACGCACACTATTGGACAAAGATGAGAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTAACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCACACCTGGTATTTCTTGGAGTACAGATGAATGCCAGCATGTGATAGATGATAGCTCATTGAGTCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTTAGATATTGAGGTGTTGATTATTGGATCATTTTTTAAGAGTCAATCGGAGGTGACAACATGTAAGTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCAGCTGAGGTTTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCTCGTCATAAAGTTGGACGGGTCCCATTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGAGAATTTGATTTCAGAAAAGGCTTTGCTAGAAATGTAGATTTTGCAGAATTTTTTGGCAGTTCAACTGAAATGCTGCTTCATATGCGACTGGAGAATTTTCTTACTTTAAAGCCAGTGAACCCTTCAAACCATTCTTTTGAGGGTGATATGGAGAAAAGGAATTTAATTTTCAAGCTTATTTCACTGAGAGAGGAAGAGGAATACTCTATTAAGGATGAACCAACTACAGAATTGGATATATCCAAACACGTGGTGAGGGAGCATCTTTTTCACAGGCAGATTAAAGAGAAGCTATACTCATGGCTTCTTCATAAAGTAACTGAGAGTGGTAAAGGGCCCAATGTATTAGACAAGGATGGCCAAGGTGTGATACACTTAGCAGCTGTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGGCAGCTCTTCACTGGGCTGCATTCTGTGGCAGAGAGCGGACAGTTGCTTTCCTGGTGTCCATCGGAGCAGATTGTGGAGCACGGACAGATCCATCTCCTGCATTTCTGTCTGGTAGAGAAGCTGCAGATCTTGCCTCTGAAAACGGGCACAAAGGAATCTCTGGTTTTCTTGCCGAGTGTTCATTAACTCACAAACTTGAAACCATCACAATGGATGATCAAAAAGGTGGTCGACAAGAAATTTCAGGAATGAAAGGGGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGCTCTGTGGTGATATGCCAGATGCCCTCTGTCTCAAGGATTCGCTTATTGCTGTGCGTAATGCAACACAAGCCGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGGGATGATGAGCTTGGATTGTTAGATCAACAAGCCCTATCTCTTCTAGCTTCTAGGGCTTGCAAATCTGGACAACGAAATGGTTTAGCCAATGCTGCTGCAATACAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGCCAACGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTACGGAAACAGTACAAACCAATCATCTGGTCTGTGGGAATCCTAGAGAAGATCATATTACGTTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGACCAGACGCAATTAATAAAGTCCCCAGTCAACAAAATGATTCTCCGAGAGAAGATGAAGATGAAGATGATTATGATTTTCTCAAGGAGGGACGGAAACAAAAGGAAGAAAATATCAAAAAGGCCTTATCAAGGGTGAGGTCCATGGTTCAATATCCAGAGGCACGCGCCCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAACCCAAGGGAACTAACGAGGGTTTGACCAGTTCTGAAGAAGGGACAGTTGATGGTGTGGAGGATTGGATTGATATTGATATGCTTTTAGACGATGACAATTTCATTCCTATAGCATTTAACTGA 2862 0.4193 MNLFWFISQGNKNIVVNTEGDEVPQDSQKVTSLSTDSVSPSSSLMSLREDADSEDIHQISSGLRPLHESQHMGNGPLTEKIDGGVNSSYHMHSFSGDHGQSSISGTDYIPVVHGDKFRGNDTTYFDGEKTHGVAPWDTVLESTANLHNDPSLASFPSMPSSSMGSVLEQEHTIFGDLLTGKRDLTEEAESSHSFQSSWQIPFEDNSGNMPMSTLTPQSFGLQFGSDYGTSSLGYETRNTSSEIAPILYSFNGDPKEQLMQKNYPQEHADGQSQHTLKSNSAIKVSDEESVNYSSNVKRTLLDKDESLKKVDSFSRWVTKELGEVADLNMQSTPGISWSTDECQHVIDDSSLSPSLSQDQLFSINDFSPKWAYAELDIEVLIIGSFFKSQSEVTTCKWSCMFGEVEVPAEVLADGILCCQAPRHKVGRVPFYVTCSNRLACSEVREFDFRKGFARNVDFAEFFGSSTEMLLHMRLENFLTLKPVNPSNHSFEGDMEKRNLIFKLISLREEEEYSIKDEPTTELDISKHVVREHLFHRQIKEKLYSWLLHKVTESGKGPNVLDKDGQGVIHLAAVLGYDWAINPIISAGVNINFRDVNGWAALHWAAFCGRERTVAFLVSIGADCGARTDPSPAFLSGREAADLASENGHKGISGFLAECSLTHKLETITMDDQKGGRQEISGMKGVQTVSERTATPVLCGDMPDALCLKDSLIAVRNATQAADRIHQVFRMQSFQRKQLTQYEGDDELGLLDQQALSLLASRACKSGQRNGLANAAAIQIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKIILRWRRKGSGLRGFRPDAINKVPSQQNDSPREDEDEDDYDFLKEGRKQKEENIKKALSRVRSMVQYPEARAQYRRLLNVVEDFRQPKGTNEGLTSSEEGTVDGVEDWIDIDMLLDDDNFIPIAFN* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02964 953 ProSiteProfiles Ankyrin repeat region circular profile. 596 622 - -
Phac6g02964 953 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Phac6g02964 953 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Phac6g02964 953 SUPERFAMILY E set domains 363 448 IPR014756 -
Phac6g02964 953 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Phac6g02964 953 MobiDBLite consensus disorder prediction 22 53 - -
Phac6g02964 953 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Phac6g02964 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 822 IPR027417 -
Phac6g02964 953 Gene3D Immunoglobulins 356 451 IPR013783 -
Phac6g02964 953 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 47 912 - -
Phac6g02964 953 FunFam Calmodulin-binding transcription activator 2 356 452 - -
Phac6g02964 953 SUPERFAMILY Ankyrin repeat 547 657 IPR036770 -
Phac6g02964 953 Coils Coil 867 887 - -
Phac6g02964 953 SMART ANK_2a 563 592 IPR002110 GO:0005515
Phac6g02964 953 SMART ANK_2a 596 625 IPR002110 GO:0005515
Phac6g02964 953 Pfam IPT/TIG domain 363 437 IPR002909 -
Phac6g02964 953 SMART iq_5 794 816 IPR000048 GO:0005515
Phac6g02964 953 SMART iq_5 771 793 IPR000048 GO:0005515
Phac6g02964 953 MobiDBLite consensus disorder prediction 63 82 - -
Phac6g02964 953 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Phac6g02964 953 Gene3D - 772 818 - -
Phac6g02964 953 Gene3D - 531 667 IPR036770 -
Phac6g02964 953 MobiDBLite consensus disorder prediction 843 866 - -
Phac6g02964 953 ProSiteProfiles Ankyrin repeat profile. 563 595 IPR002110 GO:0005515
Phac6g02964 953 MobiDBLite consensus disorder prediction 22 47 - -
Phac6g02964 953 FunFam Calmodulin-binding transcription activator 2 771 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02964 Phac-Chr6 25941874 25953041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02964 32 924 CAMTA Transcription Factor Family AT5G64220 49.670 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02964 K21596 - gmx:100818124 1538.09