Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02961 ATGTTTCAAATCACTTCAGAACCTCATAACAGGCCACCAAGTGGCTCACTTTTTCTATTTGATAGAAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCATTGCTACTATGCCCATGGAGAAGATAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTGTAGTGAATACCGAAGGTGATGAGGTCCCACAGGATTCCCAAAAGGTTACTTCACTTAGCACAGATTCTGTCAGCCCATCAAGCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGAGGATATCCACCAAATTAGTTCTGGGTTGCGCCCATTACATGAGTCACAACATATGGGGAATGGTCCACTGACAGAAAAGATTGATGGTGGTGTGAACAGTTCATATCATATGCATTCCTTTTCAGGTGATCATGGACAGTCATCAATTTCTGGAACAGATTATATCCCAGTTGTTCATGGGGATAAATTTAGAGGAAATGACACTACGTATTTTGATGGTGAGAAAACACATGGCGTGGCACCATGGGACACTGTCTTGGAAAGCACTGCCAATTTGCATAATGATCCTTCTCTTGCATCATTTCCTTCAATGCCCTCTAGTTCAATGGGTAGTGTCCTTGAACAAGAACATACCATTTTTGGTGACCTTTTAACAGGCAAAAGAGATCTCACCGAGGAAGCAGAGAGCTCTCACTCTTTCCAATCGAGTTGGCAGATTCCTTTTGAAGACAATTCGGGAAATATGCCAATGTCAACCCTAACCCCCCAATCATTTGGTCTGCAATTTGGATCTGATTATGGCACCAGTTCACTAGGGTATGAGACTCGTAATACAAGTTCTGAAATTGCTCCGATCCTGTACAGTTTTAATGGTGATCCAAAAGAGCAGCTCATGCAGAAAAACTATCCACAAGAGCATGCAGATGGACAATCTCAACATACTCTAAAATCCAATTCTGCAATTAAAGTTTCTGATGAAGAATCTGTCAACTATAGCTCAAATGTGAAACGCACACTATTGGACAAAGATGAGAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTAACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCACACCTGGTATTTCTTGGAGTACAGATGAATGCCAGCATGTGATAGATGATAGCTCATTGAGTCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTTAGATATTGAGGTGTTGATTATTGGATCATTTTTTAAGAGTCAATCGGAGGTGACAACATGTAAGTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCAGCTGAGGTTTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCTCGTCATAAAGTTGGACGGGTCCCATTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGAGAATTTGATTTCAGAAAAGGCTTTGCTAGAAATGTAGATTTTGCAGAATTTTTTGGCAGTTCAACTGAAATGCTGCTTCATATGCGACTGGAGAATTTTCTTACTTTAAAGCCAGTGAACCCTTCAAACCATTCTTTTGAGGGTGATATGGAGAAAAGGAATTTAATTTTCAAGCTTATTTCACTGAGAGAGGAAGAGGAATACTCTATTAAGGATGAACCAACTACAGAATTGGATATATCCAAACACGTGGTGAGGGAGCATCTTTTTCACAGGCAGATTAAAGAGAAGCTATACTCATGGCTTCTTCATAAAGTAACTGAGAGTGGTAAAGGGCCCAATGTATTAGACAAGGATGGCCAAGGTGTGATACACTTAGCAGCTGTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGGCAGCTCTTCACTGGGCTGCATTCTGTGGCAGAGAGCGGACAGTTGCTTTCCTGGTGTCCATCGGAGCAGATTGTGGAGCACGGACAGATCCATCTCCTGCATTTCTGTCTGGTAGAGAAGCTGCAGATCTTGCCTCTGAAAACGGGCACAAAGGAATCTCTGGTTTTCTTGCCGAGTGTTCATTAACTCACAAACTTGAAACCATCACAATGGATGATCAAAAAGGTGGTCGACAAGAAATTTCAGGAATGAAAGGGGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGCTCTGTGGTGATATGCCAGATGCCCTCTGTCTCAAGGATTCGCTTATTGCTGTGCGTAATGCAACACAAGCCGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGGGATGATGAGCTTGGATTGTTAGATCAACAAGCCCTATCTCTTCTAGCTTCTAGGGCTTGCAAATCTGGACAACGAAATGGTTTAGCCAATGCTGCTGCAATACAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGCCAACGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTACGGAAACAGTACAAACCAATCATCTGGTCTGTGGGAATCCTAGAGAAGATCATATTACGTTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGACCAGACGCAATTAATAAAGTCCCCAGTCAACAAAATGATTCTCCGAGAGAAGATGAAGATGAAGATGATTATGATTTTCTCAAGGAGGGACGGAAACAAAAGGAAGAAAATATCAAAAAGGCCTTATCAAGGGTGAGGTCCATGGTTCAATATCCAGAGGCACGCGCCCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAACCCAAGGGAACTAACGAGGGTTTGACCAGTTCTGAAGAAGGGACAGTTGATGGTGTGGAGGATTGGATTGATATTGATATGCTTTTAGACGATGACAATTTCATTCCTATAGCATTTAACTGA 3123 0.4166 MFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIVVNTEGDEVPQDSQKVTSLSTDSVSPSSSLMSLREDADSEDIHQISSGLRPLHESQHMGNGPLTEKIDGGVNSSYHMHSFSGDHGQSSISGTDYIPVVHGDKFRGNDTTYFDGEKTHGVAPWDTVLESTANLHNDPSLASFPSMPSSSMGSVLEQEHTIFGDLLTGKRDLTEEAESSHSFQSSWQIPFEDNSGNMPMSTLTPQSFGLQFGSDYGTSSLGYETRNTSSEIAPILYSFNGDPKEQLMQKNYPQEHADGQSQHTLKSNSAIKVSDEESVNYSSNVKRTLLDKDESLKKVDSFSRWVTKELGEVADLNMQSTPGISWSTDECQHVIDDSSLSPSLSQDQLFSINDFSPKWAYAELDIEVLIIGSFFKSQSEVTTCKWSCMFGEVEVPAEVLADGILCCQAPRHKVGRVPFYVTCSNRLACSEVREFDFRKGFARNVDFAEFFGSSTEMLLHMRLENFLTLKPVNPSNHSFEGDMEKRNLIFKLISLREEEEYSIKDEPTTELDISKHVVREHLFHRQIKEKLYSWLLHKVTESGKGPNVLDKDGQGVIHLAAVLGYDWAINPIISAGVNINFRDVNGWAALHWAAFCGRERTVAFLVSIGADCGARTDPSPAFLSGREAADLASENGHKGISGFLAECSLTHKLETITMDDQKGGRQEISGMKGVQTVSERTATPVLCGDMPDALCLKDSLIAVRNATQAADRIHQVFRMQSFQRKQLTQYEGDDELGLLDQQALSLLASRACKSGQRNGLANAAAIQIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKIILRWRRKGSGLRGFRPDAINKVPSQQNDSPREDEDEDDYDFLKEGRKQKEENIKKALSRVRSMVQYPEARAQYRRLLNVVEDFRQPKGTNEGLTSSEEGTVDGVEDWIDIDMLLDDDNFIPIAFN* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02961 1040 Gene3D Immunoglobulins 443 538 IPR013783 -
Phac6g02961 1040 SUPERFAMILY Ankyrin repeat 634 744 IPR036770 -
Phac6g02961 1040 Gene3D - 859 905 - -
Phac6g02961 1040 ProSiteProfiles CG-1 DNA-binding domain profile. 1 101 IPR005559 GO:0003677
Phac6g02961 1040 Pfam IQ calmodulin-binding motif 861 879 IPR000048 GO:0005515
Phac6g02961 1040 Pfam IQ calmodulin-binding motif 884 903 IPR000048 GO:0005515
Phac6g02961 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 848 909 IPR027417 -
Phac6g02961 1040 MobiDBLite consensus disorder prediction 108 134 - -
Phac6g02961 1040 Gene3D - 618 754 IPR036770 -
Phac6g02961 1040 MobiDBLite consensus disorder prediction 930 953 - -
Phac6g02961 1040 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Phac6g02961 1040 Pfam CG-1 domain 2 94 IPR005559 GO:0003677
Phac6g02961 1040 Coils Coil 954 974 - -
Phac6g02961 1040 FunFam Calmodulin-binding transcription activator 2 858 906 - -
Phac6g02961 1040 SUPERFAMILY E set domains 450 535 IPR014756 -
Phac6g02961 1040 Pfam IPT/TIG domain 450 524 IPR002909 -
Phac6g02961 1040 MobiDBLite consensus disorder prediction 108 138 - -
Phac6g02961 1040 SMART iq_5 881 903 IPR000048 GO:0005515
Phac6g02961 1040 SMART iq_5 858 880 IPR000048 GO:0005515
Phac6g02961 1040 ProSiteProfiles Ankyrin repeat profile. 683 715 IPR002110 GO:0005515
Phac6g02961 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 999 - -
Phac6g02961 1040 FunFam Calmodulin-binding transcription activator 2 443 539 - -
Phac6g02961 1040 ProSiteProfiles IQ motif profile. 882 906 IPR000048 GO:0005515
Phac6g02961 1040 ProSiteProfiles Ankyrin repeat region circular profile. 683 709 - -
Phac6g02961 1040 SMART CG_1_2 1 96 IPR005559 GO:0003677
Phac6g02961 1040 SMART ANK_2a 650 679 IPR002110 GO:0005515
Phac6g02961 1040 SMART ANK_2a 683 712 IPR002110 GO:0005515
Phac6g02961 1040 ProSiteProfiles Ankyrin repeat profile. 650 682 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02961 Phac-Chr6 25941874 25953041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02961 2 1011 CAMTA Transcription Factor Family AT5G64220 52.976 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac6g02961 CG-1 2.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02961 K21596 - gmx:100818124 1739.16