Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02959 ATGGCGGAGGGAGCTGCTTATGGATTGCGTCGTCCATTAGATATTCAGCAATTACAGTTTGAAGCCCAGCATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCAAATCACTTCAGAACCTCATAACAGGCCACCAAGTGGCTCACTTTTTCTATTTGATAGAAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCATTGCTACTATGCCCATGGAGAAGATAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTGTAGTGAATACCGAAGGTGATGAGGTCCCACAGGATTCCCAAAAGGTTACTTCACTTAGCACAGATTCTGTCAGCCCATCAAGCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGAGGATATCCACCAAATTAGTTCTGGGTTGCGCCCATTACATGAGTCACAACATATGGGGAATGGTCCACTGACAGAAAAGATTGATGGTGGTGTGAACAGTTCATATCATATGCATTCCTTTTCAGGTGATCATGGACAGTCATCAATTTCTGGAACAGATTATATCCCAGTTGTTCATGGGGATAAATTTAGAGGAAATGACACTACGTATTTTGATGGTGAGAAAACACATGGCGTGGCACCATGGGACACTGTCTTGGAAAGCACTGCCAATTTGCATAATGATCCTTCTCTTGCATCATTTCCTTCAATGCCCTCTAGTTCAATGGGTAGTGTCCTTGAACAAGAACATACCATTTTTGGTGACCTTTTAACAGGCAAAAGAGATCTCACCGAGGAAGCAGAGAGCTCTCACTCTTTCCAATCGAGTTGGCAGATTCCTTTTGAAGACAATTCGGGAAATATGCCAATGTCAACCCTAACCCCCCAATCATTTGGTCTGCAATTTGGATCTGATTATGGCACCAGTTCACTAGGGTATGAGACTCGTAATACAAGTTCTGAAATTGCTCCGATCCTGTACAGTTTTAATGGTGATCCAAAAGAGCAGCTCATGCAGAAAAACTATCCACAAGAGCATGCAGATGGACAATCTCAACATACTCTAAAATCCAATTCTGCAATTAAAGTTTCTGATGAAGAATCTGTCAACTATAGCTCAAATGTGAAACGCACACTATTGGACAAAGATGAGAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTAACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCACACCTGGTATTTCTTGGAGTACAGATGAATGCCAGCATGTGATAGATGATAGCTCATTGAGTCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTTAGATATTGAGGTGTTGATTATTGGATCATTTTTTAAGAGTCAATCGGAGGTGACAACATGTAAGTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCAGCTGAGGTTTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCTCGTCATAAAGTTGGACGGGTCCCATTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGAGAATTTGATTTCAGAAAAGGCTTTGCTAGAAATGTAGATTTTGCAGAATTTTTTGGCAGTTCAACTGAAATGCTGCTTCATATGCGACTGGAGAATTTTCTTACTTTAAAGCCAGTGAACCCTTCAAACCATTCTTTTGAGGGTGATATGGAGAAAAGGAATTTAATTTTCAAGCTTATTTCACTGAGAGAGGAAGAGGAATACTCTATTAAGGATGAACCAACTACAGAATTGGATATATCCAAACACGTGGTGAGGGAGCATCTTTTTCACAGGCAGATTAAAGAGAAGCTATACTCATGGCTTCTTCATAAAGTAACTGAGAGTGGTAAAGGGCCCAATGTATTAGACAAGGATGGCCAAGGTGTGATACACTTAGCAGCTGTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGGCAGCTCTTCACTGGGCTGCATTCTGTGGCAGAGAGCGGACAGTTGCTTTCCTGGTGTCCATCGGAGCAGATTGTGGAGCACGGACAGATCCATCTCCTGCATTTCTGTCTGGTAGAGAAGCTGCAGATCTTGCCTCTGAAAACGGGCACAAAGGAATCTCTGGTTTTCTTGCCGAGTGTTCATTAACTCACAAACTTGAAACCATCACAATGGATGATCAAAAAGGTGGTCGACAAGAAATTTCAGGAATGAAAGGGGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGCTCTGTGGTGATATGCCAGATGCCCTCTGTCTCAAGGATTCGCTTATTGCTGTGCGTAATGCAACACAAGCCGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGGGATGATGAGCTTGGATTGTTAGATCAACAAGCCCTATCTCTTCTAGCTTCTAGGGCTTGCAAATCTGGACAACGAAATGGTTTAGCCAATGCTGCTGCAATACAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGCCAACGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTACGGAAACAGTACAAACCAATCATCTGGTCTGTGGGAATCCTAGAGAAGATCATATTACGTTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGACCAGACGCAATTAATAAAGTCCCCAGTCAACAAAATGATTCTCCGAGAGAAGATGAAGATGAAGATGATTATGATTTTCTCAAGGAGGGACGGAAACAAAAGGAAGAAAATATCAAAAAGGCCTTATCAAGGGTGAGGTCCATGGTTCAATATCCAGAGGCACGCGCCCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAACCCAAGGGAACTAACGAGGGTTTGACCAGTTCTGAAGAAGGGACAGTTGATGGTGTGGAGGATTGGATTGATATTGATATGCTTTTAGACGATGACAATTTCATTCCTATAGCATTTAACTGA 3243 0.4181 MAEGAAYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIVVNTEGDEVPQDSQKVTSLSTDSVSPSSSLMSLREDADSEDIHQISSGLRPLHESQHMGNGPLTEKIDGGVNSSYHMHSFSGDHGQSSISGTDYIPVVHGDKFRGNDTTYFDGEKTHGVAPWDTVLESTANLHNDPSLASFPSMPSSSMGSVLEQEHTIFGDLLTGKRDLTEEAESSHSFQSSWQIPFEDNSGNMPMSTLTPQSFGLQFGSDYGTSSLGYETRNTSSEIAPILYSFNGDPKEQLMQKNYPQEHADGQSQHTLKSNSAIKVSDEESVNYSSNVKRTLLDKDESLKKVDSFSRWVTKELGEVADLNMQSTPGISWSTDECQHVIDDSSLSPSLSQDQLFSINDFSPKWAYAELDIEVLIIGSFFKSQSEVTTCKWSCMFGEVEVPAEVLADGILCCQAPRHKVGRVPFYVTCSNRLACSEVREFDFRKGFARNVDFAEFFGSSTEMLLHMRLENFLTLKPVNPSNHSFEGDMEKRNLIFKLISLREEEEYSIKDEPTTELDISKHVVREHLFHRQIKEKLYSWLLHKVTESGKGPNVLDKDGQGVIHLAAVLGYDWAINPIISAGVNINFRDVNGWAALHWAAFCGRERTVAFLVSIGADCGARTDPSPAFLSGREAADLASENGHKGISGFLAECSLTHKLETITMDDQKGGRQEISGMKGVQTVSERTATPVLCGDMPDALCLKDSLIAVRNATQAADRIHQVFRMQSFQRKQLTQYEGDDELGLLDQQALSLLASRACKSGQRNGLANAAAIQIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKIILRWRRKGSGLRGFRPDAINKVPSQQNDSPREDEDEDDYDFLKEGRKQKEENIKKALSRVRSMVQYPEARAQYRRLLNVVEDFRQPKGTNEGLTSSEEGTVDGVEDWIDIDMLLDDDNFIPIAFN* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02959 1080 FunFam Calmodulin-binding transcription activator 2 483 579 - -
Phac6g02959 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 949 IPR027417 -
Phac6g02959 1080 SUPERFAMILY E set domains 490 575 IPR014756 -
Phac6g02959 1080 Pfam IQ calmodulin-binding motif 901 919 IPR000048 GO:0005515
Phac6g02959 1080 Pfam IQ calmodulin-binding motif 924 943 IPR000048 GO:0005515
Phac6g02959 1080 Gene3D - 658 794 IPR036770 -
Phac6g02959 1080 FunFam Calmodulin-binding transcription activator 2 898 946 - -
Phac6g02959 1080 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Phac6g02959 1080 MobiDBLite consensus disorder prediction 148 174 - -
Phac6g02959 1080 Gene3D Immunoglobulins 483 578 IPR013783 -
Phac6g02959 1080 MobiDBLite consensus disorder prediction 970 993 - -
Phac6g02959 1080 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Phac6g02959 1080 SMART iq_5 898 920 IPR000048 GO:0005515
Phac6g02959 1080 SMART iq_5 921 943 IPR000048 GO:0005515
Phac6g02959 1080 Coils Coil 994 1014 - -
Phac6g02959 1080 MobiDBLite consensus disorder prediction 148 178 - -
Phac6g02959 1080 ProSiteProfiles Ankyrin repeat region circular profile. 723 749 - -
Phac6g02959 1080 ProSiteProfiles IQ motif profile. 922 946 IPR000048 GO:0005515
Phac6g02959 1080 SMART ANK_2a 723 752 IPR002110 GO:0005515
Phac6g02959 1080 SMART ANK_2a 690 719 IPR002110 GO:0005515
Phac6g02959 1080 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Phac6g02959 1080 SUPERFAMILY Ankyrin repeat 674 784 IPR036770 -
Phac6g02959 1080 Pfam IPT/TIG domain 490 564 IPR002909 -
Phac6g02959 1080 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Phac6g02959 1080 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1039 - -
Phac6g02959 1080 Gene3D - 899 945 - -
Phac6g02959 1080 SMART CG_1_2 18 136 IPR005559 GO:0003677
Phac6g02959 1080 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02959 Phac-Chr6 25941874 25953041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02959 1 1051 CAMTA Transcription Factor Family AT5G64220 53.377 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac6g02959 CG-1 8.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02959 K21596 - gmx:100818124 1820.05