Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02950 ATGGAAGACGCAGCGTTGAAGGTGGAGTCCCTTGCGTGCATAGACTCAACCACTCTCTCTCACTCTGAGCTCCTCGCCCTTTCTCTCTCCTCTCTCTGCACCTTCGACCTTCGCGCCACCAATCACCTCGTCACTCCCAAGATCGACCCTGCGCTCTTCAACGAGAGCGCCGGCTCCCGCCGCCAGACCTACTCCCGCCCCCAGTCCTCCCCGACGGGCCGCCGCCGCCGCCTCGCCGGCCTCCTCCCCGCACCCAAGCTCCCTCCCCTCCCTGCTCACGACCCCGAGAACGCCGAAAACCGCCTCATCATCGACTACCTCAAACAACTCATCAGAGAGGACCCCAAGTTCGACCAGGTCCACCTCGCTCCCCCTTCACTTCCCCAACCCACCGCGAAGCGCAAGCGAGGCCGCAAGCCCAAGCTCAAACTCCACCTGGAACACTGCTACCGCGGAATCGACGTTCTTAACCGAAACGGCGTCGCCGTTGATCTCTCGCAATTGGCCAGCTCCCAAGACCCCTTCGCCTATGAGCTCAAGAGACGCACTGAGGGCTTGAGCAACGAAGAGGAGCTGTTAGGGTTTTTGAGGGATTTGCCTGGCCAGTGGGGGAGCCGTAGGAAGAAGCGGAGGATTGTTGATGCTGCGGATTTCGGCGATGTGTTGCCGCTCAGTTGGAAGATTCTTCTCGGTCTGAAGAGGAAGGACGGTCGTGCCTGGATCTATTGCCGCAGATACATTAGCCCTAGTGGACAGCATTTTGTGTCTTGCAAAGAGGTTTCTTCGTATTTACAGTCTCTTCTAGGTAATGGTGATGCACAGTCGCAAAGTAGTCGTAGGAGTGAAAATGTGGTGCAGGAACAGATAGTGCCTGCTGAAAATTCTGCTGGTGTCACTCCTGAACGTCAAGATCAGAGGCAGATTATTGCCGTGAACACGGAGGTGCCTGGTTTGTTTGCGGCTGCTAATGAACGAGTGAAGGAGGTTGCCTTGTTGGGGATTGAAAATCTTGCAGATGTGCAGATTCACGATCTGTTTGAATGTCGCAAGTGCAATATGAGTTTTGACGAGAAGGATTCGTACTTGCGACACCTGTTGTCAGTTCACCAGAGGACGACGAGGCGGTACCGGCTCGGTTCGTCTGTTGGAGATGGAGTTATAATTAAAGATGGGAAGTTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTAGAAAGGCGTCGCTACAATGGTCATGTGGGGATTCATGTTAGGAATTATGTGAGGAGGGTCGAAGATTCACCAGGTCAGATAAATGTCCAGAGGACAGATGACAAGTCTCCAGTCAGGGAGGACGTGCCTTTAAGGATATCTAAGATGGATGCCCTAATTGAAATTGCTCAAAACTCTATTATGGAGGGTTCTGTCACGGAACCCCATCATTTAGCTAAACTGAATGAGATTCCTGCTTCGGATATTGCTGTTGGTTGCTTGGACCACAACGGAAAAGAGTCTCCAATCAGTGAAAAGCAGATGGAAGATAGCTTGACTAGAAATAATGTGGATCATCATAATATGGATGGAAAGGTAGAGGAAATTGATGATGATAACCATGTGATAGATGTAAAAATGGTTACTTTTCTTGATAACATGAGTTTGTTATCTGTAAATAAGCAAGATGTTAAAGCATCGGAGACTTCTGACGCAAAAGATGATGTGGAATTGACCATTGAGGAACTGGATCAATCTGGGATTGATTTGGATGGTGTTACTGAAGTTCGTTTACTTCCTTTATCTGAACTTAACATGATACCAGAATCTGAAAAGAGTGAAAATTCTGGGTGTTCTAATACTAGGGTTCAGTTTAAACTTGATGAAGACATTAGTAACAAGAGTGAGTTGGAATTTGGTTTAAATTGCTTGAAGGATGTACCTGTTACAGTTAGCACTAATGTCCAAGAGATGGGAATGGCAGCTTCTGAAGAAAATGTGCTACATTCTAGGGCTTTTAACTCCTCTATATCCACAGAACAATCTTTGGATTGTTTGCCTGCATTCAGCTCTGATAAGGGAGGAAAACAGTTTTGCAGTCTTGACAATGAATATGATAATGTGAAGGGTCTCCAGGAATTGAGGTTTGATGAAATAGATAATGTTGATTATGATTTTGCAAGGGTTCAGGATTCTCCTTCTCTGCCTTCTGTATCAACTGAATTGGCCAATAACAGAGTGATGGAAGAGACGTATGCTTCCTCAGTTCAGTTTGAATCACAGGAGGGTATGCTAAATATTGGTGGCAGAGATCAGCTTACAACTGTGTGTGTATGGTGTGGAATAGAGTTTAACCATGAAGCTGTTAATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGTCCAGCTTGTAAAGCAAAAATCTCTGGTCAAATCAACGTGTTGGACTGTGAATAG 2427 0.4722 MEDAALKVESLACIDSTTLSHSELLALSLSSLCTFDLRATNHLVTPKIDPALFNESAGSRRQTYSRPQSSPTGRRRRLAGLLPAPKLPPLPAHDPENAENRLIIDYLKQLIREDPKFDQVHLAPPSLPQPTAKRKRGRKPKLKLHLEHCYRGIDVLNRNGVAVDLSQLASSQDPFAYELKRRTEGLSNEEELLGFLRDLPGQWGSRRKKRRIVDAADFGDVLPLSWKILLGLKRKDGRAWIYCRRYISPSGQHFVSCKEVSSYLQSLLGNGDAQSQSSRRSENVVQEQIVPAENSAGVTPERQDQRQIIAVNTEVPGLFAAANERVKEVALLGIENLADVQIHDLFECRKCNMSFDEKDSYLRHLLSVHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRRVEDSPGQINVQRTDDKSPVREDVPLRISKMDALIEIAQNSIMEGSVTEPHHLAKLNEIPASDIAVGCLDHNGKESPISEKQMEDSLTRNNVDHHNMDGKVEEIDDDNHVIDVKMVTFLDNMSLLSVNKQDVKASETSDAKDDVELTIEELDQSGIDLDGVTEVRLLPLSELNMIPESEKSENSGCSNTRVQFKLDEDISNKSELEFGLNCLKDVPVTVSTNVQEMGMAASEENVLHSRAFNSSISTEQSLDCLPAFSSDKGGKQFCSLDNEYDNVKGLQELRFDEIDNVDYDFARVQDSPSLPSVSTELANNRVMEETYASSVQFESQEGMLNIGGRDQLTTVCVWCGIEFNHEAVNSEIQPDSVGFMCPACKAKISGQINVLDCE* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02950 808 ProSiteProfiles Zinc finger C2H2 type domain profile. 346 374 IPR013087 -
Phac6g02950 808 MobiDBLite consensus disorder prediction 120 140 - -
Phac6g02950 808 MobiDBLite consensus disorder prediction 54 76 - -
Phac6g02950 808 SMART c2h2final6 346 369 IPR013087 -
Phac6g02950 808 SMART c2h2final6 393 415 IPR013087 -
Phac6g02950 808 ProSiteProfiles Zinc finger C2H2 type domain profile. 393 420 IPR013087 -
Phac6g02950 808 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 3 597 IPR037472 -
Phac6g02950 808 Gene3D Classic Zinc Finger 336 418 - -
Phac6g02950 808 SUPERFAMILY DNA-binding domain 218 266 IPR016177 GO:0003677
Phac6g02950 808 SUPERFAMILY beta-beta-alpha zinc fingers 345 415 IPR036236 -
Phac6g02950 808 MobiDBLite consensus disorder prediction 56 72 - -
Phac6g02950 808 ProSitePatterns Zinc finger C2H2 type domain signature. 348 369 IPR013087 -
Phac6g02950 808 ProSitePatterns Zinc finger C2H2 type domain signature. 395 415 IPR013087 -
Phac6g02950 808 MobiDBLite consensus disorder prediction 273 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02950 Phac-Chr6 25907523 25912524 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac6g02950 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02950 - - var:108341719 1268.06