Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02941 ATGGAGAAGAACATCCCTGATCCAGATGACTTCAAGAAGCCAATGGCCTTCTTTCTCGTACGCCACCATTCTGATCAGCTCCACTCCATTGTTTCTTCTCCCGATTCCGACCTTCACTTCCCTCTTTTCGTCGATTTTGCAGAATTGTTTGATGAGGAACCTCGTGTTGCTAGTCTCCTCTTTGGTAAACCCAATACCTATTTGCGAGTATTCGACGCGGCTGCCATTTGGGCACAGCAAATCGTATTGGCGGAGGGTAAGAAAGGGGTTGAGAAAAAGTCCATTCATGTTCGTATCTATACCAGTGGCTCAGCCCTTGAATTCCCTGAAACTTTTCCAAGCATAGGACGTGTCCGCGTGCAGCACCATGGAATTCTTCTCACTCTCAAAGGGATAGTGACTAGGTCTGGAGCAATCAAAATGCATGAAGGGGAGAGGACGTACATGTGTCAAAAATGCAAAAACAGCTTCCCAGTTCATCCTTTGGTGGAAGCTAGAAACTCCATATCATTACCTTCAATTTGCCCAATTAAGCAGAATTCCAAGCCCTGTGCAGGCACGAAATTCCAGTATGTAGAAAATACTATAGTATGCAATGATTATCAGGAGATAAAAATTCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCAATTCCTCGTTCAATTCTTGTCATCTTAAAGGACGACCTTGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTGTCTTAACAGCAAAATGGGCTCCAGAGTTGAAGGATGTGCGTTGTGACCTTGATCCTGTATTAATTGCCAACAATGTAAGGAGAGTCAATGAACTGAAGTCAGAAATTGATATTTCTGATGATATTGTCATGAAATTCAAGCAGTTTTGGGCTCACTTCAAAGATTCACCTCTAAAAGGGAGGAATGCTATTCTGCGAGGAATTTGCCCGCAAGTATTTGGCCTTTTCACTGTCAAGTTGGCTGTTGCATTAACTCTTATTGGAGGTGTGCAACACGTTGATGTTTCTGGAACTAGGATAAGAGGGGAGTCCCATTTACTCTTGGTTGGTGATCCTGGTACTGGAAAATCTCAGTTTCTGAAATTTGCTGCAAAATTGTGCAACCGATCTGTTATTACCACTGGATTGGGAAGCACAAGGGAATGGATGTTGGAAGCTGGAGCTCTTGTTTTGGCAGATGGAGGATTGTGTTGCATAGATGAATTTGATAGTATGAGGGAGCATGATAGAGCAACAATACATGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACAACACTCAGCACCAGAACAACTGTATTTGGTGCCACAAATCCCAAGGGGCAGTTCGATATTGTCCTTGTTCTATTGGATACAAAAAATCCTGATTGGGATGCAGTGGTTTCATCTCATATTCTTTCTGAGGCAGAACCGGATAGCAGCACTGATGACGAAGGTCTGGTAAATAGCTGGCCACTTGCTACACTCAAGAGGTAA 1506 0.4356 MEKNIPDPDDFKKPMAFFLVRHHSDQLHSIVSSPDSDLHFPLFVDFAELFDEEPRVASLLFGKPNTYLRVFDAAAIWAQQIVLAEGKKGVEKKSIHVRIYTSGSALEFPETFPSIGRVRVQHHGILLTLKGIVTRSGAIKMHEGERTYMCQKCKNSFPVHPLVEARNSISLPSICPIKQNSKPCAGTKFQYVENTIVCNDYQEIKIQESTQVLGVGAIPRSILVILKDDLVDVVKAGDDVIVTGVLTAKWAPELKDVRCDLDPVLIANNVRRVNELKSEIDISDDIVMKFKQFWAHFKDSPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDVSGTRIRGESHLLLVGDPGTGKSQFLKFAAKLCNRSVITTGLGSTREWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGQFDIVLVLLDTKNPDWDAVVSSHILSEAEPDSSTDDEGLVNSWPLATLKR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02941 501 Gene3D - 118 248 IPR012340 -
Phac6g02941 501 Gene3D - 279 501 IPR027417 -
Phac6g02941 501 Gene3D - 142 199 - -
Phac6g02941 501 SUPERFAMILY Nucleic acid-binding proteins 39 254 IPR012340 -
Phac6g02941 501 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 24 500 IPR031327 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 PRINTS Mini-chromosome maintenance (MCM) protein family signature 419 432 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 PRINTS Mini-chromosome maintenance (MCM) protein family signature 345 360 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 PRINTS Mini-chromosome maintenance (MCM) protein family signature 391 405 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 ProSiteProfiles MCM family domain profile. 304 449 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 SMART AAA_5 346 466 IPR003593 GO:0016887
Phac6g02941 501 SMART mcm 111 500 IPR031327 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 477 IPR027417 -
Phac6g02941 501 Pfam MCM P-loop domain 306 451 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac6g02941 501 Pfam MCM OB domain 117 247 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02941 Phac-Chr6 25845477 25856025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02941 15 501 Core DNA Replication Machinery Family AT2G14050 67.429 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02941 K10738 - gmx:100776255 810.446