Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02911 ATGGAGGGCTACGGCGGAGGGAGTAGAGGGGAGGCGGAGCGCTGGCTCTACACGGCCAACAAGGTTTTGAGTGCACGTGACTTGCACGGGGCCCGCTCATTTGCGATACGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACCGAGCTTCTTTTGACGGTTATCGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGCTACGCCATCCTCCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGCCCAGTACCGCCGTCTCGCCACCCAGCTCGACCCTCACCACAACCCATTCGCCTTCGCCGCTCATGCCTTCACTCTCGTCAACGACGCCTGGTCCGTACTTTGCAACTCCGCCAAGAAGGCCCTCTACGACAACCAACTCAGACTCCTCACTCAACCCCCTCCTCCTCCTCCTCCTCCTCCACCGCCGCCGCAACTTCCCGCTTCTGCGGTTACCTTCTTCCCGATTCAACCTCCGCAACCGAACCTAAACCCGACCCCGCAACAAGTTCCTCAGCGGGAAAAAGGCCCTAGGCCTTGGGTAGAGGTGGAGGTGCCGAGTCGGAAGGGCAATGCGAGCGAGTTGACTCGAGCGAGTGAGACCGGGAGCGAAGGGGAGAGTTTCTGGACCGCGTGCCCTTATTGTTACGTTATGTACGAGTATCCGAAGGTGTACGTGGACTGTACGCTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGGTACGGTCGCCGCCGAAAGATGGTGTTGGTTCGTTTTCCGGTTGGGGTTTTTTCCCCGTGGGGTTTTCTGGAGATTTTAGAGACATTAACGGTTCTTCTTCCAATTGGAACCCTTTTTCCCCTTTGATTCCCTGCGCTTTCAAAGGGGAGGAGATGCAGAGTAGGAAGCACCAGAAGGGGCCTTATGTTTTCTACGACGATGACGCATCTGCGGAGTTCGCGGAGGGTTCCGACACGACGGAGGATGATTCCGGTGATGATGATTGGCGTGGCGGGAAACAGAAGGGGATGGTGACAAAGAAGAGGAGGAGAAAGAGGGGGAGGAAGAGAAGCAATGGTGGTGGTGGTGATGATGTTAGGAGGGAACCGATTGAGAGGCCTCGGAGAAGGGTTCATAATCATAGTGGTGGTTCTGGGAATGTTAATGGGAATGTGGAGAACGGTGAGGTTGCGGATGGTGATGGTGTTGCGGCGGTGCTAGATTCTAGTAAGAAGGGTGCGTTGGGTGGTTCGAGGAGGAGGGGTGAGAAGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTTGCATGGAGTGGATGAAGTGAATGAAAACGGAACTGGGAATGCTGAGGACAATATTGAAGGGATTGGGTTTTTTGAGGGACTTGACGAGTTCCTTAGTAGCTTGCCCATTCTCAATGTTGTTGCAGATGACAAGGTTAAGGGTCATTAG 1488 0.5544 MEGYGGGSRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHLDCYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVNDAWSVLCNSAKKALYDNQLRLLTQPPPPPPPPPPPPQLPASAVTFFPIQPPQPNLNPTPQQVPQREKGPRPWVEVEVPSRKGNASELTRASETGSEGESFWTACPYCYVMYEYPKVYVDCTLRCQSCRRGFHAVVVRSPPKDGVGSFSGWGFFPVGFSGDFRDINGSSSNWNPFSPLIPCAFKGEEMQSRKHQKGPYVFYDDDASAEFAEGSDTTEDDSGDDDWRGGKQKGMVTKKRRRKRGRKRSNGGGGDDVRREPIERPRRRVHNHSGGSGNVNGNVENGEVADGDGVAAVLDSSKKGALGGSRRRGEKNLGKLDLNVEFSNEVEEPLHGVDEVNENGTGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02911 495 MobiDBLite consensus disorder prediction 138 157 - -
Phac6g02911 495 MobiDBLite consensus disorder prediction 347 361 - -
Phac6g02911 495 CDD DnaJ 70 124 IPR001623 -
Phac6g02911 495 SMART dnaj_3 69 127 IPR001623 -
Phac6g02911 495 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Phac6g02911 495 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Phac6g02911 495 MobiDBLite consensus disorder prediction 325 401 - -
Phac6g02911 495 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Phac6g02911 495 MobiDBLite consensus disorder prediction 136 208 - -
Phac6g02911 495 Gene3D DnaJ domain 59 140 IPR036869 -
Phac6g02911 495 Pfam DnaJ domain 70 132 IPR001623 -
Phac6g02911 495 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 362 - -
Phac6g02911 495 MobiDBLite consensus disorder prediction 362 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02911 Phac-Chr6 25710134 25713073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02911 11 494 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.431 4.81e-92 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02911 - - gmx:100778926 651.358