Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02886 ATGGCTCCTTGCCATGTTGGTCTCCATGCAACCAACAATCTATTGTGTTATGCAGTGGGAATGATGTTCTTACTTCTTCTTATGGTTGGTTTTGCAAACCCACTTTCATTTCGTCACAAGGGATTTGAGAATAATGATGTCAAGGTTGAAGGAGATGCTACTTTGTCAGAGTCAGAAATCCAACTCACTAAAACCACAAGGTACCAAAGTAATGCTTATAGTGTTGGGAGGGTCACAAATTTTGAGAGATTGCACCTATGGGACATGAGCACAGGAAAAATCACTGACTTCACTACCGAATTTTCCTTTGTCATTTTCTCAAATGAGACTAGTTTTGGAGATGGCTTGGCTTTTTTCTTTGCAGATCCAGAGCTCCCATTTTCCCATCAAATACAAGAAGGAGGTGGTCTTGGTCTTCTTGATGGTAACCAATTGTTGGATTCAACTAAACATCCATTTGTAGCAGTGGAGTTTGACACTCATACAAATTCATGGGATCCACCTGGCCCTCATGTAGGTATAAATTTCAACTCTATGAGATCTAACAAAACTGTTCCATGGGCCATTGATATTAGGGAAATGAAAGTTTATTATTGTGTAATTGAGTACAATGCAACTACTCACAGTTTAAATGTTTCTTTCACTGGATACAATTTCAATGCCAAGTCAGTAAAAAGTTATATCTCATGCAATGTTGACCTGAGATATTACCTACCAGAGTGGGTTATATTTGGCTTCTCAGCTGCTACAGGATTTATGTTTGAGTTGAACACACTGCACTCATGGTCCTTCCATTCAACTTTACAAATTAATGAGAATGTGTCAAATAAGATACCTCCAGTTCTAGCCTCACCAATCCCAAATCCTAGTCCTTCACCAAACCCAAATCCTAGTCCTTCACCAAATTCCACTGATAATATTAGCTCTAAACAAGAGGGAAACAAAGGTTTATTGATGGGACTAAAAGCTGGGGTAGGCATAGCTGCAAGTTTCCTTATTGTAGGGTTGGTTTGTATTTTAATGTGGAGGAGGAGGGCTAAAGGGAAAAAAGAAGATTCAATTCTTGATCTGGGCATGGATGATGAATTCCAAAAGGTCACTGGACCCAAAAGATTCTGCTATAAGGAATTGGCAAGTGCAACAAATAACTTTGCAGAGTCACAAAAGATTGGACAGGGTGGTTTTGGTGGTGTGTATAAAGGCTATTTGAAAGAATTGAACTCCAACGTTGCTATAAAGAGGATATCAAGTGAATCTAGGCAAGGAGCAAAGGAATATGCAAGTGAAGTTAAGATCATCAGCCAACTAAGGCACAGGAATTTAGTACAATTAATTGGGTGGTGCCACATGAAGAAAGATCTCCTCCTTATATATGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATGGTGGAAAAAGCATCTTGACATGGCAGATGAGGTACAACATTGCCATGGACTTGGCTCTGGCAGTGTTGTACCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAATCCAGCAACATTATGTTGGATTCAAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGCTGGTTGATCATGAGAAAGGATTCCAAACTACAATTCTAGCAGGGACAAGAGGCTACATAGCCCCTGAATACTTCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTCTTGGGGTTGTTTTACTAGAGTTGGCCACTGGAAGAAAACCAGTTGATCTCAATGCCAAGGAAGGTCAAATTACCATATTTGAGTGGGTTTGGGAGCTCTATAAATTGGGAAAGTTACTTGAAGTGGTAGACACAAAACTTGGGGGAGCATTTGATGAGGAACAAATGAAACATTTAGTGATTTCTGGCCTTTGGTGTGCCAATCCAGATTATACATCTAGACCATCTGTAAGGCAATTGATTCAAGTGCTCAAGTTTGAAGCTCCTTTACCAGTTCTCCCACAAAAATTGCCTGAGCCAAATTATGATTCTCCAATTATGAGTACAATATTTGCTTCAATTTCTTCTCCCCTCTCTGGCTACATGTTAGAACCAAATACAATGTAA 2094 0.3973 MAPCHVGLHATNNLLCYAVGMMFLLLLMVGFANPLSFRHKGFENNDVKVEGDATLSESEIQLTKTTRYQSNAYSVGRVTNFERLHLWDMSTGKITDFTTEFSFVIFSNETSFGDGLAFFFADPELPFSHQIQEGGGLGLLDGNQLLDSTKHPFVAVEFDTHTNSWDPPGPHVGINFNSMRSNKTVPWAIDIREMKVYYCVIEYNATTHSLNVSFTGYNFNAKSVKSYISCNVDLRYYLPEWVIFGFSAATGFMFELNTLHSWSFHSTLQINENVSNKIPPVLASPIPNPSPSPNPNPSPSPNSTDNISSKQEGNKGLLMGLKAGVGIAASFLIVGLVCILMWRRRAKGKKEDSILDLGMDDEFQKVTGPKRFCYKELASATNNFAESQKIGQGGFGGVYKGYLKELNSNVAIKRISSESRQGAKEYASEVKIISQLRHRNLVQLIGWCHMKKDLLLIYEFMQNGSLDSHLYGGKSILTWQMRYNIAMDLALAVLYLHEEWEQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGFQTTILAGTRGYIAPEYFTTGKARKESDIYSLGVVLLELATGRKPVDLNAKEGQITIFEWVWELYKLGKLLEVVDTKLGGAFDEEQMKHLVISGLWCANPDYTSRPSVRQLIQVLKFEAPLPVLPQKLPEPNYDSPIMSTIFASISSPLSGYMLEPNTM* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02886 697 MobiDBLite consensus disorder prediction 281 309 - -
Phac6g02886 697 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Phac6g02886 697 ProSiteProfiles Protein kinase domain profile. 384 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02886 697 FunFam L-type lectin-domain containing receptor kinase IX.1 33 277 - -
Phac6g02886 697 Gene3D Transferase(Phosphotransferase) domain 1 461 673 - -
Phac6g02886 697 CDD lectin_legume_LecRK_Arcelin_ConA 35 268 IPR001220 GO:0030246
Phac6g02886 697 Pfam Protein kinase domain 385 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02886 697 ProSitePatterns Legume lectins alpha-chain signature. 238 247 IPR000985 -
Phac6g02886 697 FunFam L-type lectin-domain containing receptor kinase IX.1 369 460 - -
Phac6g02886 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Phac6g02886 697 SUPERFAMILY Protein kinase-like (PK-like) 368 676 IPR011009 -
Phac6g02886 697 MobiDBLite consensus disorder prediction 282 300 - -
Phac6g02886 697 PANTHER - 53 657 - -
Phac6g02886 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 272 IPR013320 -
Phac6g02886 697 CDD STKc_IRAK 390 654 - -
Phac6g02886 697 Pfam Legume lectin domain 35 275 IPR001220 GO:0030246
Phac6g02886 697 Gene3D Phosphorylase Kinase; domain 1 369 460 - -
Phac6g02886 697 Gene3D - 33 279 - -
Phac6g02886 697 SMART serkin_6 384 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02886 697 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Phac6g02886 697 FunFam Lectin-domain containing receptor kinase A4.3 461 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02886 Phac-Chr6 25571999 25574212 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02886 21 671 Receptor kinase-like Gene Family AT5G10530 43.328 7.12e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac6g02886 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02886 - - gmx:100814713 1094.34