Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02880 ATGGGGAATGGAGGTTTTAGCACACTAACTCTTGTGTTGTGCTATGCAATGCTAACAGTTTCATTCCTCCCTCCTACTAATCCACTAACGTTCAGCTACACCCACTTTTGGGAAGATGATGCAAGGCTGCAACTGCAAGGAGACGCAGAAGTTTCACGTTCAGAAATCCAAGTCACATCTAACGGGGAAGGCCAGAGCAACAGTTACAGTGTTGGACGTGTCACACCTTTTCAAAACATGCAGCTATGGGATATGAGTTCTGGGAAACTCACAGACTTCACTACTCAATTTTCCTTCTCTGTTTATTCAGATGAAGATCTGTATGGAGATGGGTTGGCATTCTTCTTGGCGGATCCTGGGCTTCCCCTTTTGAATAACATCACAGAAGGGGGTGGTCTTGGCCTTGTGGACGGTGGCCAAGTGTTGAATTCAACTCACCACTCATTTGTGGCAGTGGAGTTTGACACCTTCCAAAATCCATGGGACCCTGAAGACCCTCATGTAGGTATCAATTTCAACTCTATGAAGTCCAACATAACTGTACCATGGCTAGCTGATATGTCAAAAAACGATTCTTACAGTTGTAGCATTGAGTACAATTCCACCACTCTTAGTTTAAGTGCTTCTTTCAGTGGCTACAATTACGAAAAGGGTGGTCGAGTAGAAAATAGCTTTTCATACCAAGTTGATTTGAGAAAGCACTTACCAGAGAGGGTTATGGTTGGGTTCTCAGCAGCTACGGGAGACTTGTTTGAGAACCATATTCTGAAGTCATGGTCTTTTAGTTCAAGCTTACAAATTAGTCATACTTCTGATGGTAATAGTAAAGTAGTTGAGTGGCTAGGAATTGGGATGCTGGGTTTGGTGGTTTTGTTAGGATTGTCCTGTTTTCTGATCTGGAGAAGGATTAAAGGAAAGGGAGAAATCTTGGAACTTGATCTACAAATGGATGATGAATTCCAAAAGGGAATAGGACCCAAGAGGTTTCGCTACAATGAACTTGAAAGTGCAACAAATAAATTTTCAGAGTCAGAGAAGCTGGGACAAGGTGGCTTCGGCAGCGTCTATAGGGGTTTTCTGAAGGATCTAAACTCCTATGTTGCTATCAAGAGGGTATCAAGAGAGTCTAAGCAAGGGGTGAAGGAATATGCTACTGAAGTTAAGATCATTAGCCAGTTGAGGCACAAGAATCTGGTGCAACTCCTTGGTTGGTGCCATAGAGAAAAAGATCTCCTTCTTGTGTATGAATTCATGCCAAATGGAAGCTTGGATTTCCATTTATATGGGAAGGGGTTCTTGACATGGCCAATAAGGTATAACATAGCTCTAGGCCTGGCTTCAGCATTGCTATACCTGCAAGAAGAGTGGGAAAAATGTGTTCTTCACAGGGACATAAAATCAAGCAACATAATGTTGGATTCAAGTTTCAATGCTAAGCTTGGTGACTTTGGTTTGGCTAGGTTGGTGGATCATGAGAAGGGGTCACAAACCACATTTATAGCTGGGACAAGAGGGTACATTGCACCAGAATATGTGACTACAGGGAAAGCTTATAAGGAATCTGATATATACAGTTTTGGGGTAGTTTTGTTGGAGATAGCAAGTGGAAGAAAACCCATAGACCTAAGTGCCAAGGAGGGGAAGGTAACAGTGGTAGAGTGGGCTTGGGAACTGTATGAATTGGGAGAGATAGTTGAAGTAGCAGACCCAAAACTGTGTGGAGAATTTGATGAGGAGGAAATGAAAAGGTTGGTGGCTATAGGACTTTGGTGTGCTCATCCAAACTACAGATTCAGGCCCTCTGTGATGCAAGTCATCCAAATGCTTAAATTTGAAGCTGAATTGCCAACTCTCCCAAAGTTCTTGCCACTCCAAGACTTCTATCCTTTAACAGTAAAAGCAATTTTTTCATCACCTTCAAACACTGTGTTTAAGGAGGATTTTTTGTAG 1950 0.4246 MGNGGFSTLTLVLCYAMLTVSFLPPTNPLTFSYTHFWEDDARLQLQGDAEVSRSEIQVTSNGEGQSNSYSVGRVTPFQNMQLWDMSSGKLTDFTTQFSFSVYSDEDLYGDGLAFFLADPGLPLLNNITEGGGLGLVDGGQVLNSTHHSFVAVEFDTFQNPWDPEDPHVGINFNSMKSNITVPWLADMSKNDSYSCSIEYNSTTLSLSASFSGYNYEKGGRVENSFSYQVDLRKHLPERVMVGFSAATGDLFENHILKSWSFSSSLQISHTSDGNSKVVEWLGIGMLGLVVLLGLSCFLIWRRIKGKGEILELDLQMDDEFQKGIGPKRFRYNELESATNKFSESEKLGQGGFGSVYRGFLKDLNSYVAIKRVSRESKQGVKEYATEVKIISQLRHKNLVQLLGWCHREKDLLLVYEFMPNGSLDFHLYGKGFLTWPIRYNIALGLASALLYLQEEWEKCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTFIAGTRGYIAPEYVTTGKAYKESDIYSFGVVLLEIASGRKPIDLSAKEGKVTVVEWAWELYELGEIVEVADPKLCGEFDEEEMKRLVAIGLWCAHPNYRFRPSVMQVIQMLKFEAELPTLPKFLPLQDFYPLTVKAIFSSPSNTVFKEDFL* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02880 649 Pfam Protein kinase domain 342 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02880 649 Gene3D - 27 279 - -
Phac6g02880 649 FunFam L-type lectin-domain containing receptor kinase IX.1 27 274 - -
Phac6g02880 649 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Phac6g02880 649 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Phac6g02880 649 SUPERFAMILY Protein kinase-like (PK-like) 325 628 IPR011009 -
Phac6g02880 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 270 IPR013320 -
Phac6g02880 649 PANTHER - 57 613 - -
Phac6g02880 649 Pfam Legume lectin domain 29 272 IPR001220 GO:0030246
Phac6g02880 649 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02880 649 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Phac6g02880 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Phac6g02880 649 CDD STKc_IRAK 347 610 - -
Phac6g02880 649 FunFam L-type lectin-domain containing receptor kinase IX.1 326 417 - -
Phac6g02880 649 CDD lectin_legume_LecRK_Arcelin_ConA 29 265 IPR001220 GO:0030246
Phac6g02880 649 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Phac6g02880 649 SMART serkin_6 341 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02880 649 Gene3D Transferase(Phosphotransferase) domain 1 418 628 - -
Phac6g02880 649 FunFam Lectin-domain containing receptor kinase A4.3 418 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02880 Phac-Chr6 25556727 25558804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02880 12 628 Receptor kinase-like Gene Family AT5G10530 46.057 2.79e-175 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac6g02880 Pkinase 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02880 - - gmx:100780181 817.764