Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02858 ATGAGGAATTTTAATATGGAGATTTCATCAATCAGAGGGTTACCTCAACTGGGGATAATGGAGGATCCTAACTTTCTCCATCAGTGGCAGTTAAACCCTACTGATACAACTAGCTTAACAGGTGCTGCTTTTGGTGAGAGTTTGCAAAAGCTCTCATTCTCTGGTAACTCAAACTTCAACCTCAAAACAACCATGGAAACATCACCAAATGGAAATGAAAGACCAACAAAACAGCTCAGAAACAACAGCTGGAATAGCAACAAAAGTCAACAACAGACACCAGACACACAATATGCTTCATGCTCAAATCTTCTTTCATTTGTTAATTCGAATTACTCAAATGAATTGGGACTAGGGAAACCTAAGGTGGAGATGGAGTGTCCTAAAATTGATAACAGTAATCTTGCAGAGATGTTGATCTCTCAAGGAACCTTGGGGAATCAAAACTATCACTTCAAGGCCAGCCATGAGGCCAAAAAGATTGAAACACGCCCCAAACTTTCTCAACCTCAGGACCACATAATAGCTGAAAGGAAGCGGAGAGAGAAGCTCAACCAACGGTTCATTGCTCTATCTGCTCTCGTTCCTGGTCTAAAGAAGATGGACAAAGCTTCTGTTCTTGGAGAATCAATCAAGTACATGAAACAATTGCAAGAGAAAGTGAGTTCACTTGAGGAGGAACAGAACAGGAAGAGAACTGTGGAATCTGTGGTAACTGTGAAGAAATCTCAGCTATCGAGCGATGCTGAAGGCTCTTCCAGTTCAGAAACTGGTGGTACATTGGACGAGGTACTACCTGAAATTGAAGCAAGAATTTGTGAAAGAAATGTTCTCATAAGAATACACTGTGAGAAGAATAAAGGAATCATAGAGAAAACGATCAGCGAAATTGAGAAACTCCATTTGAAAGTTACCAATAGCAGTGCGTTGTCATTTGGGAGTTTCATTCTTGATATAACCATTATTGCTCAGGTAAATTCTGCACTTATTCCATTGGCTAAACTAAGTTTCAATGCAGCAATAACACCTGGTTCAAATAATTTAGAAACAACTGTTCATGTCTAA 1065 0.3962 MRNFNMEISSIRGLPQLGIMEDPNFLHQWQLNPTDTTSLTGAAFGESLQKLSFSGNSNFNLKTTMETSPNGNERPTKQLRNNSWNSNKSQQQTPDTQYASCSNLLSFVNSNYSNELGLGKPKVEMECPKIDNSNLAEMLISQGTLGNQNYHFKASHEAKKIETRPKLSQPQDHIIAERKRREKLNQRFIALSALVPGLKKMDKASVLGESIKYMKQLQEKVSSLEEEQNRKRTVESVVTVKKSQLSSDAEGSSSSETGGTLDEVLPEIEARICERNVLIRIHCEKNKGIIEKTISEIEKLHLKVTNSSALSFGSFILDITIIAQVNSALIPLAKLSFNAAITPGSNNLETTVHV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02858 354 CDD bHLH_AtNAI1_like 171 243 - -
Phac6g02858 354 Coils Coil 207 234 - -
Phac6g02858 354 MobiDBLite consensus disorder prediction 59 96 - -
Phac6g02858 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Phac6g02858 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 234 IPR036638 GO:0046983
Phac6g02858 354 Gene3D - 167 241 IPR036638 GO:0046983
Phac6g02858 354 SMART finulus 174 223 IPR011598 GO:0046983
Phac6g02858 354 PANTHER BHLH TRANSCRIPTION FACTOR 42 329 - -
Phac6g02858 354 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02858 Phac-Chr6 25385068 25387915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02858 168 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 61.111 1.76e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac6g02858 HLH 5.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02858 - - gmx:100798018 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02858 6 25385068 25387915 Phac6g02858 6 25385068 25387915 ECH