Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02857 ATGAGGAATTTTAATATGGAGATTTCATCAATCAGAGGGTTACCTCAACTGGGGATAATGGAGGATCCTAACTTTCTCCATCAGTGGCAGTTAAACCCTACTGATACAACTAGCTTAACAGGTGCTGCTTTTGGTGAGAGTTTGCAAAAGCTCTCATTCTCTGGTAACTCAAACTTCAACCTCAAAACAACCATGGAAACATCACCAAATGGAAATGAAAGACCAACAAAACAGCTCAGAAACAACAGCTGGAATAGCAACAAAAGTCAACAACAGACACCAGACACACAATATGCTTCATGCTCAAATCTTCTTTCATTTGTTAATTCGAATTACTCAAATGAATTGGGACTAGGGAAACCTAAGGTGGAGATGGAGTGTCCTAAAATTGATAACAGTAATCTTGCAGAGATGTTGATCTCTCAAGGAACCTTGGGGAATCAAAACTATCACTTCAAGGCCAGCCATGAGGCCAAAAAGATTGAAACACGCCCCAAACTTTCTCAACCTCAGGACCACATAATAGCTGAAAGGAAGCGGAGAGAGAAGCTCAACCAACGGTTCATTGCTCTATCTGCTCTCGTTCCTGGTCTAAAGAAGATGGACAAAGCTTCTGTTCTTGGAGAATCAATCAAGTACATGAAACAATTGCAAGAGAAAGTGAGTTCACTTGAGGAGGAACAGAACAGGAAGAGAACTGTGGAATCTGTGGTAACTGTGAAGAAATCTCAGCTATCGAGCGATGCTGAAGGCTCTTCCAGTTCAGAAACTGGTGGTACATTGGACGAGGTACTACCTGAAATTGAAGCAAGAATTTGTGAAAGAAATGTTCTCATAAGAATACACTGTGAGAAGAATAAAGGAATCATAGAGAAAACGATCAGCGAAATTGAGAAACTCCATTTGAAAGTTACCAATAGCAGTGCGTTGTCATTTGGGAGTTTCATTCTTGATATAACCATTATTGCTCAGATGGATATGGAATTTTGCATGACAGTGAAGGATCTCGTGAGAAGTTTACGCTCAGCTTTTTCATACTAG 1041 0.4025 MRNFNMEISSIRGLPQLGIMEDPNFLHQWQLNPTDTTSLTGAAFGESLQKLSFSGNSNFNLKTTMETSPNGNERPTKQLRNNSWNSNKSQQQTPDTQYASCSNLLSFVNSNYSNELGLGKPKVEMECPKIDNSNLAEMLISQGTLGNQNYHFKASHEAKKIETRPKLSQPQDHIIAERKRREKLNQRFIALSALVPGLKKMDKASVLGESIKYMKQLQEKVSSLEEEQNRKRTVESVVTVKKSQLSSDAEGSSSSETGGTLDEVLPEIEARICERNVLIRIHCEKNKGIIEKTISEIEKLHLKVTNSSALSFGSFILDITIIAQMDMEFCMTVKDLVRSLRSAFSY* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02857 346 CDD bHLH_AtNAI1_like 171 243 - -
Phac6g02857 346 Coils Coil 207 234 - -
Phac6g02857 346 MobiDBLite consensus disorder prediction 59 96 - -
Phac6g02857 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 234 IPR036638 GO:0046983
Phac6g02857 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Phac6g02857 346 PANTHER BHLH TRANSCRIPTION FACTOR 42 344 - -
Phac6g02857 346 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Phac6g02857 346 SMART finulus 174 223 IPR011598 GO:0046983
Phac6g02857 346 Gene3D - 167 241 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02857 Phac-Chr6 25385068 25387915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02857 168 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 60.556 2.50e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac6g02857 HLH 5.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02857 - - gmx:100798018 561.607