Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02839 ATGTCTACAAAAATGAAGACCACCACAAAAAATCTTAATCCTCTTGTTTTCTTGGGGTCATTATTCAGTCTCTTTATGGCGGGTTTTGGTGCTGAAAGTGAAATCTATTGCTTGCAAACCATCAAGAACATGGACCCATCTAATATCTTATCTAGCTGGGATTTCCAGACCAACATTGATGGTGTCATATGTACATTCAGCGGTGTTGAATGCATCAGAAATCATGTGGAAGATAGAGTAATCGGTCTCTGGCTATCTAACATGGGGCTGAAGGGCCAGTTTCCTAGTTGCATTGAAGATTTCACATGGTTGCAGACTCTGAACCTCTCACACAACGAGCTTTCTGGATATATCCCAAACGATATATCATCTAAGCTGCCATATCTGGACACACTTGATCTCTCAAATAATTATTTCTCTGGTGAAATTCCAAAGGGTATTGCCAATTTGTCAGGCTTAATTACCCTTCTACTTGATGGCAATCAGTTAACGGGCCAAATCCCACAAGATCTTGGGTTGCTTCCCTGGCTGAGAGATTTTAGTGTTGCTAACAATTTCTTGGAAGGGTCAGTGCCTGTTTTTGTGAGCAATCTTAATGTGAGTTTGAGCTATGTCAATAATAGTGGACTCTGTGGGGGAACACTAGGAAGATGTGACGAGAGCTTGTTTGGAAGATCGTTTTGGTATAGTTTTATTATTGGTTTTGTTTCCTCAGCTACTTCTGTTCTAGTATCTTGCATGTACTATTATGCACCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCTATTCATCCCCTAATCAAGAAGCAGAACGCTGAACAAGAAGCTGAATTGCTACCACTGGCCTTTCAAGAGCAACGAAGCAAAGAGCTATCAATATTGTTGGAGAGATTGATTACTAGAATGAGGTTCATGGAATTATGCAAGGCAACTGATTACTTTTGCACAGATAACGTGTTGGGGATAGGAACGACAGGGATTATGTACAAGGCAAAGGTATCAAATAACTGTTTTCTGGCAGTTAAAAGACTATATGATGCTGATAAGTACAAGTGGGAATTTTTACTTGAAATAATGATTCCGGGAAGACACAGGCACAGAAACATAGTTCCACTGCATGGATTCTGCATAGAGAAACAGGAAAGGGTTTTGGTCTATAAGTACATTTCTAATGGAAGACTCAGTGATTGGTTACAATCTGAGGAGGAACATCATCCAATAAAATTAGAATGGCCTGAGAGGATTCACATTGCACTTGGGCTTGCAAGAGGTTTATCTTGGCTCCATAAAAGGTGCAAGATAGTCCACCTCAATTTAGATTCGGATTGTGTCTTGCTGGACGAGAGTTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCAAAATTCATAAACCAGAGTGTTGAAGATCATGTGAGGATGAAAATGTTTCTGGTTGATGGAGTTGGAGTGAAGGGTTGTGCTGAGAGGGATGTCTATGATTTTGGAATAATCCTTTTTGAACTTATAACGGGGAAAAGACTAAGCCAATCGGTTGATTCTTCAGACAGTATTAGTGGGCATTTGATGAAGTATATCAGCAAGAACTTGTTCACTGATCCTGCTGACTTTTATGACGCCATTGACGATGGTATCATTGGGAAGGGTTTTGATGATAAAATCGTACGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTTTAAATCAAAGGCCAAAGATGGTTGATGTGCACCAAACTATAAGAGCTATGTGGGAGGGCTACAAACCCTGCTTTGATTCTGAAAGTCTGAAACTGTCTATGGATTGTGCTGACCATATAACGTGTATCAGCGAAATTGAATGTATTGAATAG 1857 0.399 MSTKMKTTTKNLNPLVFLGSLFSLFMAGFGAESEIYCLQTIKNMDPSNILSSWDFQTNIDGVICTFSGVECIRNHVEDRVIGLWLSNMGLKGQFPSCIEDFTWLQTLNLSHNELSGYIPNDISSKLPYLDTLDLSNNYFSGEIPKGIANLSGLITLLLDGNQLTGQIPQDLGLLPWLRDFSVANNFLEGSVPVFVSNLNVSLSYVNNSGLCGGTLGRCDESLFGRSFWYSFIIGFVSSATSVLVSCMYYYAPWTEFKKRRSNAIHPLIKKQNAEQEAELLPLAFQEQRSKELSILLERLITRMRFMELCKATDYFCTDNVLGIGTTGIMYKAKVSNNCFLAVKRLYDADKYKWEFLLEIMIPGRHRHRNIVPLHGFCIEKQERVLVYKYISNGRLSDWLQSEEEHHPIKLEWPERIHIALGLARGLSWLHKRCKIVHLNLDSDCVLLDESFEPKISNFGKAKFINQSVEDHVRMKMFLVDGVGVKGCAERDVYDFGIILFELITGKRLSQSVDSSDSISGHLMKYISKNLFTDPADFYDAIDDGIIGKGFDDKIVRLLEVACDCVKTSLNQRPKMVDVHQTIRAMWEGYKPCFDSESLKLSMDCADHITCISEIECIE* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02839 618 SUPERFAMILY Protein kinase-like (PK-like) 292 587 IPR011009 -
Phac6g02839 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 584 IPR046959 -
Phac6g02839 618 ProSiteProfiles Protein kinase domain profile. 315 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02839 618 FunFam Nuclear pore complex protein NUP107 32 193 - -
Phac6g02839 618 SUPERFAMILY L domain-like 42 223 - -
Phac6g02839 618 Gene3D Phosphorylase Kinase; domain 1 278 389 - -
Phac6g02839 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Phac6g02839 618 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
Phac6g02839 618 Gene3D Transferase(Phosphotransferase) domain 1 390 595 - -
Phac6g02839 618 Pfam Protein kinase domain 318 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02839 Phac-Chr6 25278778 25281397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02839 4 589 Receptor kinase-like Gene Family AT3G28450 33.987 8.86e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phac6g02839 Pkinase 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02839 - - gmx:106795644 929.858