Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02828 ATGTTTGAGGCTTGGATTTCTCTCAAGAAGACCCTTCAGTGCAAACCACATCCAAATCATGTTCATGATCCAGAGACTATTAGGCAACAAAAAGGTAATCAGAGAAAAAAGTTAGGCAATGTTGAGAGTTCAAATACCAAAGATTTCATCCAAGGAAGCAAGAGGCACTCTAAAAATCCCCTAAGTTTCAAAGGGGACATTGACATCACTGCTCCCATAATCGACCAGATTAATCTTGATAGCTCAAACCATGAAACTAGTCGACGTTTTCCTTGTCCTCAAAGCCATATCAGCAATAAAGCTTCTCGTAGAACACAAAGGTCAGCTACATCTTCAAGGACAGCATACCCTGTAGACCACAATGAAGCAAATGGCTCTTCCAATACAAGGACGTTGGTTCAGATGGATTCTGATGGTTGTTCATCCTTAACATGTCATAAATGTGGCCAGAAATTAAAAAATCTTGTTGCTTTAGAAGCACACCATATCTCCGACCACTCAGTGATTGAACTTGAGGAAGATTCGTCGAGACAGATCATAGAAACAATATGTGGAACAAGGTCGGTTTATTCTGAAAGCATGTTGGGTGAGATTGGGTGCATCTTAAAGGTTCTGAACATGCCAAAAACCTTTGCTTGCTTTGAGGAGTACAGAGAAAAGGTGAAGGAAAAGGCTGAGAAACTAAAGAAGAAGCACCCTCGTTGTGTGGCTGATGGAAACGAACTTTTAAGGTTCCATGGCACAACCATTGCATGTTCTCTGGGCATAAACAGTTCTTATACGCTTTGCACTTTAGAGTATTGTGGTATATGTCAAATTCTGAGACATGGGTTTTCGAGCAACAAGGAATTCAAAGGTGCATTGGGGGTTTACACCACTTCCACAAGTGGGAAAGCCTTTGAATCCATTTCCATTATGACATCCCATGAGAGACCATTTTCAAGAAAGTCCATCATAGTTTGCAGAGTAATAGCTGGGAGAATTTATAGCCCTCTTGAAGGAATTGAAGAAAGGTGTGATTCAGAGTTTGATTCATTGGCAGAAAAAACAAATGATGTTGAGGAACTTTACGTCTTAAATCCCAGAGCCCTTCTCCCTTGCTTTGTAGTAATCTACAAACAGCAAACACCCAAGTTTAGAAGGGTCATTCCAAGCTTAAGGATAAGTAGCTTTTAA 1176 0.4039 MFEAWISLKKTLQCKPHPNHVHDPETIRQQKGNQRKKLGNVESSNTKDFIQGSKRHSKNPLSFKGDIDITAPIIDQINLDSSNHETSRRFPCPQSHISNKASRRTQRSATSSRTAYPVDHNEANGSSNTRTLVQMDSDGCSSLTCHKCGQKLKNLVALEAHHISDHSVIELEEDSSRQIIETICGTRSVYSESMLGEIGCILKVLNMPKTFACFEEYREKVKEKAEKLKKKHPRCVADGNELLRFHGTTIACSLGINSSYTLCTLEYCGICQILRHGFSSNKEFKGALGVYTTSTSGKAFESISIMTSHERPFSRKSIIVCRVIAGRIYSPLEGIEERCDSEFDSLAEKTNDVEELYVLNPRALLPCFVVIYKQQTPKFRRVIPSLRISSF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02828 391 MobiDBLite consensus disorder prediction 33 48 - -
Phac6g02828 391 MobiDBLite consensus disorder prediction 16 65 - -
Phac6g02828 391 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 372 - -
Phac6g02828 391 SUPERFAMILY ADP-ribosylation 225 375 - -
Phac6g02828 391 ProSitePatterns Zinc finger C2H2 type domain signature. 145 166 IPR013087 -
Phac6g02828 391 Gene3D - 166 377 - -
Phac6g02828 391 MobiDBLite consensus disorder prediction 82 129 - -
Phac6g02828 391 MobiDBLite consensus disorder prediction 16 32 - -
Phac6g02828 391 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02828 Phac-Chr6 25230928 25232832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02828 4 373 C2H2 Transcription Factor Family AT5G54630 42.094 5.56e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac6g02828 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02828 - - gmx:100807216 577.015