Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02822 ATGGAGCATGAAGATGAAGACTGGATGTGTGTTACTATAGAAGAAAATGATTGTAGCACACAAAGGATGAGTAGGAAGAGGAACTATGATGATAACACAAGAGAGTTCAAATCAAAAAACCTTGAGGTTGAAAGGAGGAGGAGGGAGAAGCTCAGTAGGAGGCTTTTGATGCTGCGGTCTATAAACCCTATCATCACAAATATGAATAGAGGAACAATTATTGTAGATGCAATCACCTACATAGAGAAGCTGCAAGACGAAGTCCAGAGTCTCAGCCAACAACTTCACCAAATGGAAGCAACTTCAGAGGAAACAGCTGAGACAAAAATAGATGAAATTGAAGCTGTGGAAGATATGAGGAATTGGGGGATACAGGCAGAGATCATTGTGGCACAAATAGATGAGAATAAGCTCTGGGTCAAGATCATCATTGAAAAAAAGAAGGGAAGTTTCAGCAAATTGATGGAGACACTCAATTACTTCGGCATTGAGCTCATAGACACTAATCTCACAACCACAAAAGGAGCATTTCTGATTACAAGCTGCATACAGGTCAAAGATGGAGAAAGACTTCAAGTTAATCAAATCAAGAATTTGTTGCAAGATATTATCAATGACATGTAA 624 0.3894 MEHEDEDWMCVTIEENDCSTQRMSRKRNYDDNTREFKSKNLEVERRRREKLSRRLLMLRSINPIITNMNRGTIIVDAITYIEKLQDEVQSLSQQLHQMEATSEETAETKIDEIEAVEDMRNWGIQAEIIVAQIDENKLWVKIIIEKKKGSFSKLMETLNYFGIELIDTNLTTTKGAFLITSCIQVKDGERLQVNQIKNLLQDIINDM* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02822 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 100 IPR036638 GO:0046983
Phac6g02822 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Phac6g02822 207 Coils Coil 74 108 - -
Phac6g02822 207 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 22 202 - -
Phac6g02822 207 SMART finulus 41 90 IPR011598 GO:0046983
Phac6g02822 207 Gene3D - 25 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02822 Phac-Chr6 25201749 25202745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02822 22 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 42.784 1.81e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02822 - - gmx:100793637 314.694