Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02816 ATGGCTGAGGAGTTTCAAGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTAATCCAACAAGAAGTGTGTTCCCTCTCATGTCATCAACTTGTTCCGTGGCAGCAGCTGATGCAGGAAACTACAGCACTTGGCAAACCACTGAGGACATTAATAACTTCATTTCTTCTGATAATTCTCTGAGTTTTCTTGATGTTGAGAAACCCCAGCAGAGGGACTCAGCTAGTGGAACTGGTAGCATCCTCATCGATTCCACCTTACAAATGATGGGTTTTGGCATGTCATCTTCAACTTCATCCAATTGGAATCAATCTTTATTAGGGAGCGATTTTCATTCTGTGCTTCAAGAAGAAACAGCCATGGGTGGTGGTTCTTCCCAGGATTCACAAATCCAAAAGGATTGGAGTCCAAAGAATTTCTCATCTGCTGCTGGCCCAGATTCCACCGTTGATGCTTTCAAGTCAATGAACCAAGAATTTTCATTGGATCAGCAAAGTCTGAGTTCCGTTGTTACAACCACCGGATCATTATCTGATGGTTTTCCAGTTGTTTCAGCCTCTTATGGTTACCCTTCAACCTTGATACAAAGCTTATATGAGCCTGAGCCTCAACCACAGCCACAGAACTCACTTTTCACCAACCCCACCATGTCCTATTCTTCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCCAAAATCTCTTCTCTTCTCAAACCCTCAACGCCAAAACAGCAGCTTAGTGGATTGCACTTTTCCAACACCACTTCTTTCTGGAATGGTTCAGCCGAAGCACTTCATGACATAAGAGCAAGTGTTTTTGCTTCATCACAGCCAAAATTTGAAGACAAATCCAACACTCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCTCCAGACGCAGCATCATCCGCGAAGAAAAATTCTTCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAGGAAAAGCTAGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACGGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGACCAAGTCAGTGTGTTAAGCACTCCATATATTAAAAATGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGAGTCAGAAGGGCGAAAAGAAGATCTGAGAAGCCGAGGGCTGTGTTTGGTGCCGATTTCGAGCACGTTCCCGGTGGCTAATGAGAGCAGTGTTGATTTCTGGACGCCAACATTCGGAGGTGCAGTGATTGGAAGGTAG 1347 0.4417 MAEEFQAAICGESWWNINPTRSVFPLMSSTCSVAAADAGNYSTWQTTEDINNFISSDNSLSFLDVEKPQQRDSASGTGSILIDSTLQMMGFGMSSSTSSNWNQSLLGSDFHSVLQEETAMGGGSSQDSQIQKDWSPKNFSSAAGPDSTVDAFKSMNQEFSLDQQSLSSVVTTTGSLSDGFPVVSASYGYPSTLIQSLYEPEPQPQPQNSLFTNPTMSYSSSTANYGTCSNELSPTWSKISSLLKPSTPKQQLSGLHFSNTTSFWNGSAEALHDIRASVFASSQPKFEDKSNTPNTLLNKLKREESPDAASSAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYIKNGAPIQHQQDCDNLKESEGRKEDLRSRGLCLVPISSTFPVANESSVDFWTPTFGGAVIGR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02816 448 FunFam Transcription factor bHLH123 family 336 398 - -
Phac6g02816 448 MobiDBLite consensus disorder prediction 283 328 - -
Phac6g02816 448 CDD bHLH_AtbHLH_like 332 383 IPR045239 -
Phac6g02816 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Phac6g02816 448 Gene3D - 336 390 IPR036638 GO:0046983
Phac6g02816 448 MobiDBLite consensus disorder prediction 283 299 - -
Phac6g02816 448 MobiDBLite consensus disorder prediction 118 146 - -
Phac6g02816 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 392 IPR036638 GO:0046983
Phac6g02816 448 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 146 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02816 Phac-Chr6 25172752 25176218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02816 1 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.889 1.21e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02816 - - gmx:100794682 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02816 6 25172752 25176218 Phac6g02816 6 25172752 25176218 ECH