Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02815 ATGGCTGAGGAGTTTCAAGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTAATCCAACAAGAAGTGTGTTCCCTCTCATGTCATCAACTTGTTCCGTGGCAGCAGCTGATGCAGGAAACTACAGCACTTGGCAAACCACTGAGGACATTAATAACTTCATTTCTTCTGATAATTCTCTGAGTTTTCTTGATGTTGAGAAACCCCAGCAGAGGGACTCAGCTAGTGGAACTGGTAGCATCCTCATCGATTCCACCTTACAAATGATGGGTTTTGGCATGTCATCTTCAACTTCATCCAATTGGAATCAATCTTTATTAGGGAGCGATTTTCATTCTGTGCTTCAAGAAGAAACAGCCATGGGTGGTGGTTCTTCCCAGGATTCACAAATCCAAAAGGATTGGAGTCCAAAGAATTTCTCATCTGCTGCTGGCCCAGATTCCACCGTTGATGCTTTCAAGTCAATGAACCAAGAATTTTCATTGGATCAGCAAAGTCTGAGTTCCGTTGTTACAACCACCGGATCATTATCTGATGGTTTTCCAGTTGTTTCAGCCTCTTATGGTTACCCTTCAACCTTGATACAAAGCTTATATGAGCCTGAGCCTCAACCACAGCCACAGAACTCACTTTTCACCAACCCCACCATGTCCTATTCTTCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCCAAAATCTCTTCTCTTCTCAAACCCTCAACGCCAAAACAGCAGCTTAGTGGATTGCACTTTTCCAACACCACTTCTTTCTGGAATGGTTCAGCCGAAGCACTTCATGACATAAGAGCAAGTGTTTTTGCTTCATCACAGCCAAAATTTGAAGACAAATCCAACACTCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCTCCAGACGCAGCATCATCCGCGAAGAAAAATTCTTCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAGGAAAAGCTAGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACGGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGACCAAGTCAGTGTGTTAAGCACTCCATATATTAAAAATGGAGCTCCCATTCAACACCAGCAGGTACACGATAACACTTTTATTTTATCTCATGTTTCTAGCGGTACACACATGCACTCGGCACATCTAGATTCACTGCAGTCAAAATCACCATACTGA 1287 0.4305 MAEEFQAAICGESWWNINPTRSVFPLMSSTCSVAAADAGNYSTWQTTEDINNFISSDNSLSFLDVEKPQQRDSASGTGSILIDSTLQMMGFGMSSSTSSNWNQSLLGSDFHSVLQEETAMGGGSSQDSQIQKDWSPKNFSSAAGPDSTVDAFKSMNQEFSLDQQSLSSVVTTTGSLSDGFPVVSASYGYPSTLIQSLYEPEPQPQPQNSLFTNPTMSYSSSTANYGTCSNELSPTWSKISSLLKPSTPKQQLSGLHFSNTTSFWNGSAEALHDIRASVFASSQPKFEDKSNTPNTLLNKLKREESPDAASSAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYIKNGAPIQHQQVHDNTFILSHVSSGTHMHSAHLDSLQSKSPY* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02815 428 CDD bHLH_AtbHLH_like 332 383 IPR045239 -
Phac6g02815 428 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 143 424 - -
Phac6g02815 428 MobiDBLite consensus disorder prediction 283 327 - -
Phac6g02815 428 Gene3D - 336 389 IPR036638 GO:0046983
Phac6g02815 428 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Phac6g02815 428 MobiDBLite consensus disorder prediction 283 299 - -
Phac6g02815 428 MobiDBLite consensus disorder prediction 118 146 - -
Phac6g02815 428 FunFam Transcription factor bHLH123 family 336 398 - -
Phac6g02815 428 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 393 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02815 Phac-Chr6 25172752 25176218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02815 1 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 36.232 3.07e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02815 - - gmx:100794682 576.244