Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02814 ATGGCTGAGGAGTTTCAAGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTAATCCAACAAGAAGTGTGTTCCCTCTCATGTCATCAACTTGTTCCGTGGCAGCAGCTGATGCAGGAAACTACAGCACTTGGCAAACCACTGAGGACATTAATAACTTCATTTCTTCTGATAATTCTCTGAGTTTTCTTGATGTTGAGAAACCCCAGCAGAGGGACTCAGCTAGTGGAACTGGTAGCATCCTCATCGATTCCACCTTACAAATGATGGGTTTTGGCATGTCATCTTCAACTTCATCCAATTGGAATCAATCTTTATTAGGGAGCGATTTTCATTCTGTGCTTCAAGAAGAAACAGCCATGGGTGGTGGTTCTTCCCAGGATTCACAAATCCAAAAGGATTGGAGTCCAAAGAATTTCTCATCTGCTGCTGGCCCAGATTCCACCGTTGATGCTTTCAAGTCAATGAACCAAGAATTTTCATTGGATCAGCAAAGTCTGAGTTCCGTTGTTACAACCACCGGATCATTATCTGATGGTTTTCCAGTTGTTTCAGCCTCTTATGGTTACCCTTCAACCTTGATACAAAGCTTATATGAGCCTGAGCCTCAACCACAGCCACAGAACTCACTTTTCACCAACCCCACCATGTCCTATTCTTCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCCAAAATCTCTTCTCTTCTCAAACCCTCAACGCCAAAACAGCAGCTTAGTGGATTGCACTTTTCCAACACCACTTCTTTCTGGAATGGTTCAGCCGAAGCACTTCATGACATAAGAGCAAGTGTTTTTGCTTCATCACAGCCAAAATTTGAAGACAAATCCAACACTCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCTCCAGACGCAGCATCATCCGCGAAGAAAAATTCTTCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAGGAAAAGCTAGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACGGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGACCAAGTGTTAAGCACTCCATATATTAAAAATGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGAGTCAGAAGGGCGAAAAGAAGATCTGAGAAGCCGAGGGCTGTGTTTGGTGCCGATTTCGAGCACGTTCCCGGTGGCTAATGAGAGCAGTGTTGATTTCTGGACGCCAACATTCGGAGGTGCAGTGATTGGAAGGTAG 1341 0.4415 MAEEFQAAICGESWWNINPTRSVFPLMSSTCSVAAADAGNYSTWQTTEDINNFISSDNSLSFLDVEKPQQRDSASGTGSILIDSTLQMMGFGMSSSTSSNWNQSLLGSDFHSVLQEETAMGGGSSQDSQIQKDWSPKNFSSAAGPDSTVDAFKSMNQEFSLDQQSLSSVVTTTGSLSDGFPVVSASYGYPSTLIQSLYEPEPQPQPQNSLFTNPTMSYSSSTANYGTCSNELSPTWSKISSLLKPSTPKQQLSGLHFSNTTSFWNGSAEALHDIRASVFASSQPKFEDKSNTPNTLLNKLKREESPDAASSAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYIKNGAPIQHQQDCDNLKESEGRKEDLRSRGLCLVPISSTFPVANESSVDFWTPTFGGAVIGR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02814 446 MobiDBLite consensus disorder prediction 283 328 - -
Phac6g02814 446 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 145 425 - -
Phac6g02814 446 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Phac6g02814 446 MobiDBLite consensus disorder prediction 283 299 - -
Phac6g02814 446 Gene3D - 336 382 IPR036638 GO:0046983
Phac6g02814 446 MobiDBLite consensus disorder prediction 118 146 - -
Phac6g02814 446 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 381 IPR036638 GO:0046983
Phac6g02814 446 CDD bHLH_AtbHLH_like 332 379 IPR045239 -
Phac6g02814 446 FunFam Transcription factor bHLH123 family 336 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02814 Phac-Chr6 25172752 25176218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02814 1 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.675 7.21e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02814 - - gmx:100794682 659.062