Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02808 ATGACGGGAAATGCAAGTGCAGCTTTGTGCCATTTGAAATTGGCTGCTGAACATGACCAAGAGGAGATGAAACGGAACAAAATTGATATCATTATTTTTGGTTTTGCTTGTATATTAATCCTTCAGAATACGTCTTATGCAGACCATGCCTTGACTCCAACATCTTCCATTGCAGATGGCCAAGAACTCATTTCTGCTGGACAGAATTTTTCTCTCGGATTCTTCACTCCAGGAACATCTAAGAGCCGCTACATAGGGATATGGTACAAGAATATTACGCCTCAAACCATAGTTTGGGTAGCAAACAGAGATAACCCACTTAATGACTCGAGAGGAAATTTAACCATTGCTGCTGACGGTAATATTGTACTTTTTGATGGAGCAGGTAACAGAATATGGTTTACAAATTCATCAAGTTCAATCGAAGAACCAATTGCAAAGCTGTTGGATTCTGGAAACTTTGTGTTGATGGATGGAAAGAAGGGTGATTCTGATGGTTACATATGGCAAAGCTTTGATAATCCAACAGACACAATGTTACCTGGGTTGATGTTGGGTTGGGATAAGAACTTAGGTATCAACAGATATTTGACTTCTTGGAAGAGTGATAATGACCCTTCTCCTGGAAACTTTACCTTCAGATTTGACCAGACAGAATTTCCTGAGTTAGTAATCCGCCGGGGAATGAACATCACATTCAGAAGTGGAATTTGGGATGGCACCCGTTTTAATTCAGATGATTGGTTGTCATTTATTGGAATTACAGCCTTCAAGCCACAACTTTCAGTAACTAGCACTGTGGCAGTGTATTGGGATGAACCTGGAGATAGATTGTCAAGATTTATGATGAAGGATGATGGACTACTTCAAAGATATATCTGGGACAATAAAAATTTTAAGTGGACTCTGATGCATGAGGCAAGAAAAGACTTTTGTGATAACTATGGAGCATGTGGGGTGAACGGTATTTGCAATATTAAGGATGTGCCTGCTTACTGCGATTGCTTGAAAGGGTTTATACCAAATTCACCGGAAGAATGGGATTCATTTAATTGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGTACACAAGGTGATAGGTTTCAGAAACTAAGCTGGGTTAAACTACCCATGTTGTTGCAATTTTGGACTAATAAAAGCAAGAGTCTTGAAGAATGCAAGGTGGAGTGCTTGAAGAACTGTTCCTGCACGGCCTACGCAAATTCAGCCTTGAATGAAGGGCCTCATGGGTGCTTGCTTTGGTTTGGAGACTTGACTGACATTCGGCATCTTATAAATGAAGAGGGTGTACAACTTGATCTTTATGTAAGGTTAGCCGCTTCAGAAATAGAGTCCACTGCTAATGCAAGTAAAAGGAGATACATTGCTCTGATTATTTCGGTACCTGTGGCACTGCTGCTTTGTTGTATCATTTTCTACCTTTCTATGAAGTATATAAAACGGAGGACAAGCACTGGTTTGGTCACAGTCACAGGTCACAGAAATCATAATGAAGATCAAGTGATATCGCCTATTTTTGATATAGATACTATTTTGACTGCTACAAACAATTTTTCTATTGAGAACAAGATCGGGGAAGGTGGTTTTGGCCCAGTATACAGGGGTAAATTGGCTAATGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACCTCAAAACAAGGCTTCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTCCAACATCGTAATCTTGTGAGTGTTTTGGGAGGGTGCACTCAAAGAGAGGAAAGAATGCTGATCTATGAATACATGCCAAATAGTAGCTTGGACCACTTCATTTTTGATCCAATACAAGGAAAGTTTTTGAACTGGAGGAAACGATATGAAATTATAGTTGGGATTGCTCGAGGACTACTTTATCTCCACCAAGATTCAAAACTGACCATCATTCATAGGGATCTAAAAACTAGCAACATTCTACTAGACAGACAATTTAACCCCAAAATTTCTGATTTTGGTGTGGCCCACATCGTTGAAGGAGATCGTTCTTCAATAACAACAGAGGATATTGCTGGGACAATTGGTTATATGCCCCATGAGTACGCAGTAAACGGGATTCTTTCCCCGAAATCTGATGTATATAGCTTTGGAGTTATAGTGTTAGAGATATTAAGTGGAATCAGAAGTAGAAGCTACAAATTCAAGCATCCAGATCATGATCACAATCTGCTGGGGCAGGCATGGACATTATGGAAAGATGGAGGAGCTGTGGGATTTATGGATGTTAACTTTGACCTTACAGTTGTTCCATCAGAATTACTAAGGTGCCTGCAAGTTGGTCTCTTGTGTGTTCAAAAGTTACCTGAAGATAGACCAACTATGTCTTCTGTGGTTTTTATGTTGAGCAATGAAAGCATTGCACTTCCCCAACCAAAGAAGACTGGGTTCTTTGAAGAAGAGTCAGAGTATCATGGGTACAGCGAGAAAGAGAGTTTTAGTAACAATGCTATGACTGTAACTCTATTAGAAGCTCGAAGTTAG 2538 0.3991 MTGNASAALCHLKLAAEHDQEEMKRNKIDIIIFGFACILILQNTSYADHALTPTSSIADGQELISAGQNFSLGFFTPGTSKSRYIGIWYKNITPQTIVWVANRDNPLNDSRGNLTIAADGNIVLFDGAGNRIWFTNSSSSIEEPIAKLLDSGNFVLMDGKKGDSDGYIWQSFDNPTDTMLPGLMLGWDKNLGINRYLTSWKSDNDPSPGNFTFRFDQTEFPELVIRRGMNITFRSGIWDGTRFNSDDWLSFIGITAFKPQLSVTSTVAVYWDEPGDRLSRFMMKDDGLLQRYIWDNKNFKWTLMHEARKDFCDNYGACGVNGICNIKDVPAYCDCLKGFIPNSPEEWDSFNWSGGCIRRTPLNCTQGDRFQKLSWVKLPMLLQFWTNKSKSLEECKVECLKNCSCTAYANSALNEGPHGCLLWFGDLTDIRHLINEEGVQLDLYVRLAASEIESTANASKRRYIALIISVPVALLLCCIIFYLSMKYIKRRTSTGLVTVTGHRNHNEDQVISPIFDIDTILTATNNFSIENKIGEGGFGPVYRGKLANGQEIAVKRLSKTSKQGFSEFMNEVGLVAKLQHRNLVSVLGGCTQREERMLIYEYMPNSSLDHFIFDPIQGKFLNWRKRYEIIVGIARGLLYLHQDSKLTIIHRDLKTSNILLDRQFNPKISDFGVAHIVEGDRSSITTEDIAGTIGYMPHEYAVNGILSPKSDVYSFGVIVLEILSGIRSRSYKFKHPDHDHNLLGQAWTLWKDGGAVGFMDVNFDLTVVPSELLRCLQVGLLCVQKLPEDRPTMSSVVFMLSNESIALPQPKKTGFFEEESEYHGYSEKESFSNNAMTVTLLEARS* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02808 845 SMART blect_4 54 175 IPR001480 -
Phac6g02808 845 Gene3D - 43 172 IPR036426 -
Phac6g02808 845 ProSiteProfiles PAN/Apple domain profile. 364 448 IPR003609 -
Phac6g02808 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Phac6g02808 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 172 - -
Phac6g02808 845 Pfam S-locus glycoprotein domain 233 342 IPR000858 GO:0048544
Phac6g02808 845 ProSiteProfiles Protein kinase domain profile. 527 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02808 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 808 - -
Phac6g02808 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 206 IPR036426 -
Phac6g02808 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 492 602 - -
Phac6g02808 845 CDD PAN_AP_plant 360 448 - -
Phac6g02808 845 PIRSF SRK 23 844 IPR024171 GO:0004674
Phac6g02808 845 SUPERFAMILY Protein kinase-like (PK-like) 507 800 IPR011009 -
Phac6g02808 845 ProSiteProfiles Bulb-type lectin domain profile. 48 169 IPR001480 -
Phac6g02808 845 Gene3D Transferase(Phosphotransferase) domain 1 603 812 - -
Phac6g02808 845 Gene3D Phosphorylase Kinase; domain 1 500 602 - -
Phac6g02808 845 Pfam D-mannose binding lectin 96 201 IPR001480 -
Phac6g02808 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 791 - -
Phac6g02808 845 SMART ntp_6 365 447 IPR003609 -
Phac6g02808 845 Pfam PAN-like domain 364 430 IPR003609 -
Phac6g02808 845 SMART serkin_6 527 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02808 845 CDD STKc_IRAK 533 800 - -
Phac6g02808 845 CDD B_lectin 54 175 IPR001480 -
Phac6g02808 845 Pfam Protein tyrosine and serine/threonine kinase 528 729 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02808 Phac-Chr6 25144985 25148854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02808 479 840 Receptor kinase-like Gene Family AT4G23150 48.485 7.15e-107 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g02808 PK_Tyr_Ser-Thr 7.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02808 - - vra:106774971 1533.47