Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02806 ATGCCAGGTTTCTTATTCTTTCTCTTTTGCTTCTTGCCATTACACATCACAATTTCATTCTCCTCAGACACTTTAACCCCAACACAAACTCTTCTAACCAACCAAATCCTGGTTTCACCAAGCCAAGTCTTTGCTTTGGGCTTCTTTTCCAGGACCAATTCCTCTTGGTACTTAGGCATATGGTACCACAACATCAGCAACGGACCCGTAGTGTGGGTGGCCAACAGAGACAACCCTCTCCACAACTCCACAGGATTTCTAACCATCGGAGAAAACAAAAACATGGTTCTGACAACTCCAGCAGGGGAACCCGTTTGGTCCTCCAATGTCACCAAAGCCAACAACCCCATTCTTCAGCTTTTGGACTCGGGAAATCTTGTTCTCAGAGAAGCAAACGTAACCGACCCCGCAAACTATCTCTGGCAAAGCTTCGATTACCCAACAGACACACTCTTACCTGGGATGAAAATGGGGTGGAACCTAGACACTGGCGTGGAGAAACACTTAACCTCGTGGAAAATAGAAGGAAAAGACCCTTCAAGTGGTGATTACTCTTTCAAGATAGATCCTCGTGGAGTACCAGAAATTTTCTTGATGAATGAAAATGATAGAATATATAGAAGTGGGCCTTGGAACGGTGAGAGATTCAGTGGGGTACCAGAGATGCAACCCGACACTGATTCCATCATGTTTGATTTTTCATACGATAACCATGGTGTGCATTATTCCTTCTCCATTGGGAACCGCTCTATTTTGTCGAGGCTAATTGTGACTTCGGGTGGTGAACTTAAGCGTCGTACTTGGGTGCCAAGCAGCAACACATGGACCACCTTTTGGTATGCACCTAAGGACCAGTGTGATGATTTCAAAGCGTGCGGTCCTAATGGTTTGTGTGACTCTAACGCCTCGCCGGTGTGCACCTGTATGAGAGGGTTCAGTCCGAGGAACCAGCAGGCGTGGAATTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGAATTTGGATTGTGGGACTGACAAGTTTTTGCATTTGGAGGACGTGAAGTTGCCTGAGACAAGTAGTGTGTTTGCGAACAGGAGCATGAACCTAGAAGAGTGTAAAGATTTGTGTCGCAGGAATTGTTCTTGCACTGCTTATGCCAACATTGAGGTCACAAACGGAGGAACCGGGTGCGTCACGTGGAGTGCTGAACTCATAGACATGAGAAAGTATCCCAGCGGTGGACAAGATCTCTTTGTCAGATTAGCAGCTTCTGATGCAGATGACACAGGATCTGCAGGTGGCTCTCACAAGACAAACCATATCGGCGAGATTGCAGGAATTACAGCTTCTGCAGCTGTAGTAATTGTGGGATTGGTTATGATTTTCTGGAAGAAGAGAAAAGTGTTAAGTATATCGAATTCGAAGACTACCCCCAGAGGTTCTTTCCAAAGAAGTAGAGAGTTGCTAACAAGTGACGGGGTATTTTCAACTAATAGAGAAAACTCGGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCTTGACAATGGCCACAAACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGGTTTGGTATTGTTTACAGGGGAAGGTTGATGGAAGGCCGTGATATTGCTGTCAAGAGGTTATCAAAAAACTCCGTGCAAGGAGTTGAAGAATTTAAGAATGAGGTGAAGTTAATTGTCAGACTTCAACATCGAAATCTTGTTCGGCTCTTTGGATGCTGCGTTGAGATGGATGAGAAGTTGCTAGTGTATGAACATATGGAAAATAGAAGCCTTTATTCCATTTTGTTTGGTAATTTTTAA 1836 0.4444 MPGFLFFLFCFLPLHITISFSSDTLTPTQTLLTNQILVSPSQVFALGFFSRTNSSWYLGIWYHNISNGPVVWVANRDNPLHNSTGFLTIGENKNMVLTTPAGEPVWSSNVTKANNPILQLLDSGNLVLREANVTDPANYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWKIEGKDPSSGDYSFKIDPRGVPEIFLMNENDRIYRSGPWNGERFSGVPEMQPDTDSIMFDFSYDNHGVHYSFSIGNRSILSRLIVTSGGELKRRTWVPSSNTWTTFWYAPKDQCDDFKACGPNGLCDSNASPVCTCMRGFSPRNQQAWNLRDGSDGCVRNTNLDCGTDKFLHLEDVKLPETSSVFANRSMNLEECKDLCRRNCSCTAYANIEVTNGGTGCVTWSAELIDMRKYPSGGQDLFVRLAASDADDTGSAGGSHKTNHIGEIAGITASAAVVIVGLVMIFWKKRKVLSISNSKTTPRGSFQRSRELLTSDGVFSTNRENSGERNMDDIELPMFDFNTLTMATNNFSEANKLGQGGFGIVYRGRLMEGRDIAVKRLSKNSVQGVEEFKNEVKLIVRLQHRNLVRLFGCCVEMDEKLLVYEHMENRSLYSILFGNF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02806 611 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 212 IPR036426 -
Phac6g02806 611 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Phac6g02806 611 Pfam PAN-like domain 337 402 IPR003609 -
Phac6g02806 611 SMART blect_4 28 147 IPR001480 -
Phac6g02806 611 Gene3D - 17 144 IPR036426 -
Phac6g02806 611 SMART ntp_6 337 416 IPR003609 -
Phac6g02806 611 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Phac6g02806 611 Gene3D Hepatocyte Growth Factor 333 414 - -
Phac6g02806 611 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Phac6g02806 611 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Phac6g02806 611 CDD B_lectin 34 147 IPR001480 -
Phac6g02806 611 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Phac6g02806 611 ProSiteProfiles Protein kinase domain profile. 522 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02806 611 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 607 - -
Phac6g02806 611 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 488 597 - -
Phac6g02806 611 CDD PAN_AP_plant 333 417 - -
Phac6g02806 611 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 144 - -
Phac6g02806 611 Pfam D-mannose binding lectin 70 173 IPR001480 -
Phac6g02806 611 Pfam Protein tyrosine and serine/threonine kinase 525 607 IPR001245 GO:0004672|GO:0006468
Phac6g02806 611 SUPERFAMILY Protein kinase-like (PK-like) 499 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02806 Phac-Chr6 25138256 25142614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02806 437 608 Receptor kinase-like Gene Family AT4G23190 39.429 6.97e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g02806 S_locus_glycop 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02806 - - gmx:100797331 1012.68