Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02804 ATGGCGGCCATGTCCATCTCCCTTCTGTTTCTCTTTTCTTTCATCTCTTTCCACAATCTGTTTTCCCTCGCGGCAAGTTCAAATATCAGGATCAGGCAGGGTGTCGTCATCAGGGACAACGACCGTGAGACATTGGTGTCTGAAGAGCTCAACTTCGTGATGGGTTTCTTCGGTTTAGACAACTCCTCTTCCCGCTACGTCGGAATTTGGTACCACAACATTCCCGCGACACCTGTTATATGGGTCGCAAACCGCGACAAACCCATCAATGGCACCGGAGGATCCATCACTGTTGCGAATGATGGCAACCTCGTAGTCCTCGATGGAGCCAAGAACCTTGTCTGGTCCACCAACGTTTCCATCGATAGCAGCAACAAAAACTGCTCGGCGACGCTTCGTGACACTGGTAACCTCGTTCTCTCGAGCGAAAAGAAAGAGTTGTGGCAAAGCTTTGAGAATCCAACGGATACATTCATGCCTGGTATGAGGGTTCCAGTGGGGGCTGCAACTGGGAAGAGTGGTGGCTATGTGTTCACTTCATGGAAATCGTCAACGGATCCTTCGAAGGGAAACTACACTATGGGGGTGGATCCTGAAGGGTTACCTCAGATAGTGGTTTGGGAAGGAGACAAAAGAAGGTGGAGAACGGGGTATTGGGATGGTATAACGTTTGAAGGGGTGTCTATGACAGGAAATTATCTTTATGGTTTTACGCTTAATGGGGATGGTAAAGGAGGTAGGTACTTCATTTATAACCCGTTAAACGGCACTGATAAGGTGAGGTTTCAAATGGGGTGGGACGGCTATGAGACAGAATTCAGGTGGAATGAGGATGAGAAACGTTGGGATGTGATTCAAAGAGGGCCTTCGCATGAGTGTGAGGTTTACAATAAGTGTGGGAGTTTCGCGGCGTGTGATGTGTCCCCTTCGGATTTACCTGTTTGTGCTTGCATACGAGGTTTTGAACCCAAGAGTAGGGATCAGTGGAATAAGGGGAACTGGTCGAGTGGGTGTACGAGGATGACTCCACTCAAGGCTCAGAGGAAGAATGTTACTTCCGCTGGCACTACTCAGGTTAGTGTTGGAGAGGATGAGTTCTTGGAGCGTAGGTCTATGAAGTTGCCGGATTTCGCACGTGTGGTTGGCACGAATGATTGTCATCAAGTGTGTTTGAACGATGATTCTTGTACGGCTTATGCCAATGTTAATGGAATAGGGTGCATGGTGTGGAATGGGGATTTGGTTGACATTCAACGTTATGATCGTGGAGGAAATACACTGCATATCCGTCTCGCTGATTCTGATTTAGATGATGGAGGTAAAAAGAACATCATTGCGATAATATCTGCTGTTGTGGCGGGGTTAATCTGCCTAGGAATCTTTGTATGGCTGGTGTATAGATTCAAGGGTAAACTTAAAGTTCTGCCTACAGTTTCCCCAGCTTCTTGTTGCAAGAATAGTGATGTACTGCCAGTTTTTGATGGAAGCAAGAGCAGAGACATGTCAGCAGAATTTTCAGGATCAGCTGACCACAGTTTGGAGGGCAGCCAACTAAGGGGGCCAGAATTTCCACTTTTCAATTTCAGTTGCATTTCAGTTGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGAAAAGGGGGTTTTGGCCCTGTCTACAAGGGAAAGCTTCCAGACGGAGAACAAATAGCTGTTAAGAGGCTTTCAAGACGGTCTGGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGCTGATAGCAAAACTACAGCACCGAAATCTGGTTAGACTAATGGGTTGTTCTATTCAAGGGGAAGAGAAGTTGCTGGTATACGAATACATGCCAAACAAAAGCTTGGATTGTTTTTTATTTAATCCATTCAAACAAACACAACTTGATTGGAGAAGACGGTTTGAAATCATTGAAGGCATTGCAAGAGGATTACTCTACTTGCACCGAGATTCAAGGCTTAGAATAATTCATCGAGATTTAAAAGCGAGTAACGTTTTGTTGGATGAAAACATGAATCCAAAAATATCAGACTTTGGATTGGCTAGGATATTTGGTGGGAACCAGAATGAAGCCAATACAAACAGAGTAGTTGGTACATATGGTTATATGGCCCCTGAATATGCTATGGAAGGTCTGTTTTCGGTCAAATCTGATGTATACAGTTTTGGTGTATTACTACTAGAAATTTTGAGTGGCCGCAGAAACACCAGTTTTCGTCACACTGATGACTCCAGCCTCATAGGATATGCGTGGCATCTTTGGAATGAACAGAGAGCAATGGAGCTAGTGGATCCATGCATTCGTAATTCTAGTCCTAAAAGCAGAGCTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAAGATTCAGCAGCTCAGAGACCAAACATGTCTGCAGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCCACGCCTACGCAACCTTTGATTACTTCCATGAGAAGATCTGAGGACAGACAATTTTACATGGAGGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTGGTAGGGAGATAG 2562 0.4496 MAAMSISLLFLFSFISFHNLFSLAASSNIRIRQGVVIRDNDRETLVSEELNFVMGFFGLDNSSSRYVGIWYHNIPATPVIWVANRDKPINGTGGSITVANDGNLVVLDGAKNLVWSTNVSIDSSNKNCSATLRDTGNLVLSSEKKELWQSFENPTDTFMPGMRVPVGAATGKSGGYVFTSWKSSTDPSKGNYTMGVDPEGLPQIVVWEGDKRRWRTGYWDGITFEGVSMTGNYLYGFTLNGDGKGGRYFIYNPLNGTDKVRFQMGWDGYETEFRWNEDEKRWDVIQRGPSHECEVYNKCGSFAACDVSPSDLPVCACIRGFEPKSRDQWNKGNWSSGCTRMTPLKAQRKNVTSAGTTQVSVGEDEFLERRSMKLPDFARVVGTNDCHQVCLNDDSCTAYANVNGIGCMVWNGDLVDIQRYDRGGNTLHIRLADSDLDDGGKKNIIAIISAVVAGLICLGIFVWLVYRFKGKLKVLPTVSPASCCKNSDVLPVFDGSKSRDMSAEFSGSADHSLEGSQLRGPEFPLFNFSCISVATNNFSEENKLGKGGFGPVYKGKLPDGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFNPFKQTQLDWRRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHTDDSSLIGYAWHLWNEQRAMELVDPCIRNSSPKSRALRCIHIGMLCVQDSAAQRPNMSAVVLMLESEATTLPTPTQPLITSMRRSEDRQFYMEGLDVSNDLTVTMVVGR* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02804 853 Pfam PAN-like domain 362 417 IPR003609 -
Phac6g02804 853 ProSiteProfiles PAN/Apple domain profile. 361 432 IPR003609 -
Phac6g02804 853 Pfam Protein tyrosine and serine/threonine kinase 541 806 IPR001245 GO:0004672|GO:0006468
Phac6g02804 853 Gene3D Transferase(Phosphotransferase) domain 1 614 818 - -
Phac6g02804 853 CDD STKc_IRAK 544 809 - -
Phac6g02804 853 SMART serkin_6 538 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02804 853 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Phac6g02804 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Phac6g02804 853 CDD B_lectin 43 154 IPR001480 -
Phac6g02804 853 SMART blect_4 34 154 IPR001480 -
Phac6g02804 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 187 IPR036426 -
Phac6g02804 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 503 613 - -
Phac6g02804 853 Gene3D Phosphorylase Kinase; domain 1 503 613 - -
Phac6g02804 853 Gene3D - 25 151 IPR036426 -
Phac6g02804 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Phac6g02804 853 PIRSF SRK 1 853 IPR024171 GO:0004674
Phac6g02804 853 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 799 - -
Phac6g02804 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 614 816 - -
Phac6g02804 853 CDD PAN_AP_plant 363 432 - -
Phac6g02804 853 SUPERFAMILY Protein kinase-like (PK-like) 523 836 IPR011009 -
Phac6g02804 853 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Phac6g02804 853 Pfam D-mannose binding lectin 79 182 IPR001480 -
Phac6g02804 853 ProSiteProfiles Protein kinase domain profile. 538 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac6g02804 853 SMART ntp_6 361 431 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02804 Phac-Chr6 25131507 25135293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02804 447 821 Receptor kinase-like Gene Family AT4G23230 53.989 3.96e-133 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac6g02804 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02804 - - gmx:102660295 1464.51